Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Analysis of mRNA expression profiles in reactivated neurons from latent PRV infection

ABSTRACT: Analysis of mRNA expression profiles in reactivated neurons from latent PRV infection

PROVIDER: PRJNA834784 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR19055348_1.fastq.gz	Fastqsanger.gz
	SRR19055348_2.fastq.gz	Fastqsanger.gz
	SRR19055349_1.fastq.gz	Fastqsanger.gz
	SRR19055349_2.fastq.gz	Fastqsanger.gz
	SRR19055350_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Analysis of mRNA expression profiles in reactivated neurons from latent PRV infection

Project description:Little is known about the latent infection period and lytic infection mechanism of pseudorabies virus. The advent of high-throughput sequencing technologies has allowed us to examine many different biological components simultaneously. To examine the effects of glucocorticoids on latently infected PRV neurons, we constructed gene expression profiles of RNA-seq data from PC-12 cell with a PRV latent infection model group (PRV group), a reactivation model group (DEX group) and a blank control group (CON group).

2025-05-02 | GSE202139 | GEO

Analysis of miRNA expression profiles in reactivated neurons from latent PRV infection

Project description:Little is known about the latent infection period and lytic infection mechanism of pseudorabies virus. The advent of high-throughput sequencing technologies has allowed us to examine many different biological components simultaneously. To examine the effects of glucocorticoids on latently infected PRV neurons, we constructed gene expression profiles of RNA-seq data for miRNA expression from PC-12 cell with a PRV latent infection model group (PRV group), a reactivation model group (DEX group) and a blank control group (CON group).

2025-04-30 | GSE202138 | GEO

Analysis of miRNA expression profiles in reactivated neurons from latent PRV infection

Project description:Analysis of miRNA expression profiles in reactivated neurons from latent PRV infection

| PRJNA834783 | ENA

Analysis of miRNA/mRNA profile of neurons infected with latent and reactivated PRV

Project description:Analysis of miRNA/mRNA profile of neurons infected with latent and reactivated PRV

| PRJNA835046 | ENA

PrV/PK15 kinetics_SLA/PrV slides

Project description:To study in vitro the epithelial cells and PrV interactions during infection, we followed PrV and PK15 cells transcriptome modifications during time-course infection (I) and mock-infection (MI).Six time points were studied: just after I and MI, 1h, 2h, 4h, 8h and 12h post-I and MI. For this study, a pig DNA/cDNA microarray containing genes of the SLA region, additional genes encoding other important immunological molecules and all the PrV genes was constructed. Keywords: infection time course

2007-12-03 | GSE8676 | GEO

Analysis of miRNA/mRNA profile of neurons infected with latent and reactivated PRV

Project description:This SuperSeries is composed of the SubSeries listed below.

2025-05-02 | GSE202209 | GEO

PrV/PK15 kinetics_QiagenNRSP8 slides

Project description:To study in vitro the epithelial cells and PrV interactions during infection, we followed PrV and PK15 cells transcriptome modifications during time-course infection (I) and mock-infection (MI). Four time points were studied: 1h, 2h, 4h and 8h post-I and MI. Four replicates of I and MI were analysed. 32 samples - The hybridization scheme which can be define as dye-switch was chosen. A balanced loop design with two independent loops, each loop containing 2 replicates of PrV infection and MI, was used. In total, 32 slides were used in this experiment.

2010-06-25 | E-GEOD-9259 | biostudies-arrayexpress

Latent human herpesvirus 6 is reactivated in chimeric antigen receptor T cells

Project description:Latent human herpesvirus 6 is reactivated in chimeric antigen receptor T cells

| PRJNA863599 | ENA

ZIC2 ChIP-Seq in KSHV latent and lytic reactivated BCBL-1 cells

Project description:ZIC2 ChIP-Seq in KSHV latent and lytic reactivated BCBL-1 cells

| PRJNA397777 | ENA

Expression profiles of circularRNAs and microRNAs in PK-15 cells infected by PrV-II

Project description:Circular RNAs (circRNAs) and microRNAs (miRNAs) participate in regulating many biological processes. However, their roles in PrV-II pathogenicity are largely unknown. Here, we analyzed the expression profile of circRNAs and miRNAs in the PrV-DX, a wild-type (WT) strain of PRV-II, and its attenuated gE-TK- PRV-DX infected cells by high-throughput sequencing.

2021-03-24 | GSE139424 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data