Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Oligo-Mouse-Microbiota (OMM12) Raw sequence reads

PROVIDER: PRJNA838765 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25305800_1.fastq.gz	Fastqsanger.gz
	SRR25305800_2.fastq.gz	Fastqsanger.gz
	SRR25305801_1.fastq.gz	Fastqsanger.gz
	SRR25305801_2.fastq.gz	Fastqsanger.gz
	SRR25305802_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 224

Similar Datasets

Effects of the human intestinal bacterium Eggerthella lenta on the liver proteome of gnotobiotic mice.

Project description:In this study, the minimal consortium Oligo-Mouse Microbiota (OMM)12 was used to study the function of Coriobacteriia under defined conditions in gnotobiotic mice. OMM12 mice with or without adding the dominant gut bacterium Eggerthella lenta were fed with diets varying in fat content or supplemented with primary bile acids. Changes in the host liver proteomes were studied using untargeted proteomics.

2024-01-19 | PXD047016 | Pride

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

synthetic gene strain:XL1-Blue cells

Project description:Oligo Pools Raw sequence reads

| PRJNA526200 | ENA

Gut microbiota

Project description:Mouse microbiota Raw sequence reads

| PRJNA1107524 | ENA

Quantitative profiling of differentially expressed miRNAs in siCTL- and siOASL-transfected HUVECs

Project description:Purpose: The goal of this study is to compare endothelial small RNA transcriptome to identify the target of OASL under basal or stimulated conditions by utilizing miRNA-seq. Methods: Endothelial miRNA profilies of siCTL or siOASL transfected HUVECs were generated by illumina sequencing method, in duplicate. After sequencing, the raw sequence reads are filtered based on quality. The adapter sequences are also trimmed off the raw sequence reads. rRNA removed reads are sequentially aligned to reference genome (GRCh38) and miRNA prediction is performed by miRDeep2. Results: We identified known miRNA in species (miRDeep2) in the HUVECs transfected with siCTL or siOASL. The expression profile of mature miRNA is used to analyze differentially expressed miRNA(DE miRNA). Conclusions: Our study represents the first analysis of endothelial miRNA profiles affected by OASL knockdown with biologic replicates.

2022-09-06 | GSE186354 | GEO

Bacteria

Project description:Mouse Fecal microbiota. Raw sequence reads

| PRJNA489470 | ENA

Mouse lung microbiota

Project description:Mouse lung microbiota Raw sequence reads

| PRJNA1357657 | ENA

mouse gut microbiota

Project description:mouse gut microbiota Raw sequence reads

| PRJNA638971 | ENA

Mouse Fecal Microbiota

Project description:Mouse Fecal Microbiota Raw sequence reads