Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Drosophila melanogaster cardinal gene sequencing in cd1 mutant

PROVIDER: PRJNA840853 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR19331906_1.fastq.gz	Fastqsanger.gz
	SRR19331906_2.fastq.gz	Fastqsanger.gz
	SRR19331907_1.fastq.gz	Fastqsanger.gz
	SRR19331907_2.fastq.gz	Fastqsanger.gz
	SRR19331908_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

CG7358 mutant Drosophila melanogaster sequencing

Project description:CG7358 mutant Drosophila melanogaster sequencing

| PRJNA432658 | ENA

ChIP-seq of MSL1 in male and female fly samples

Project description:We report the binding of MSL1 protein in male, female and mof2 mutant samples of Drosophila melanogaster and Drosophila virilis

2016-04-25 | GSE61340 | GEO

Ibf contributes to CP190 recruitment to chromatin [ChIP-seq]

Project description:ChIP-Seq peak calling of CP190 in wild-type and Ibf2 mutant Drosophila melanogaster third instar larvae Two wild-type and two Ibf2 mutant Drosophila melanogaster third instar larvae were sequenced.

2014-04-18 | E-GEOD-52240 | biostudies-arrayexpress

Cut&Run in Drosophila melanogaster control, mutant and knockdown ovaries

Project description:H3K27me3 profiles using Cleavage under targets and Release using nuclease (Cut&Run) in control and KD Drosophila melanogaster ovaries. We examined the impact on chromatin profiles in Drosophila melanogaster ovaries in which the lid, the Sin3a, the Snr1 or the mod(mdg4) gene have been selectively knocked down by tissue-specific shRNA expression. We additionally explored H3K27me3 and H3K9me3 in control and dhd mutant ovaries either carrying or not a transgene.

2021-12-10 | GSE174250 | GEO

Ibf contributes to CP190 recruitment to chromatin [ChIP-seq]

Project description:ChIP-Seq peak calling of CP190 in wild-type and Ibf2 mutant Drosophila melanogaster third instar larvae

2014-04-18 | GSE52240 | GEO

Overlapping activities of ELAV/Hu family RNA binding proteins specify the extended neuronal 3' UTR landscape in Drosophila [L1 CNS 3'seq]

Project description:The goal of this study is to perform quantitative comparison of transcriptome-wide 3'-end features of Drosophila melanogaster 1st instar larvae central neural system (L1CNS) from three genotypes: Canton-S, elav5 single mutant, and elav5/fne double mutant; Total RNAs were extracted from dissected L1CNS of Drosophila melanogaster Canton-S, elav5 single mutant, and elav5/fne double mutant; 3'-end sequencing libraries were prepared using Lexogen QuantSeq 3′ mRNA-Seq Library Prep Kit REV for Illumina with replicates for each genotype; final cDNA libraries were sequenced on Illumina HiSeq-1000 sequencer with SE-50 mode. 3'-end sequencing data were mapped onto the corresponding UCSC genome assemblies: Drosophila melanogaster (dm6) and 3′ end clusters were derived and quantified within a 25 bp window. We found that L1CNS from Canton-S expresses neural specific 3' UTR extensions like head, while in L1CNS from elav5 single mutant, global neural specific 3' UTR extensions are not significantly lost, but in elav5/fne double mutant L1CNS, there is a dramatic loss of neural specific 3' UTR extensions. We reported for the first time demonstration of trans-acting factors that globally maintain this very distinctive tissue-specific APA landscape.

2020-10-01 | GSE155531 | GEO

RNA-sequencing of murine wild-type and Cdx-mutant E9.5 yolk sacs

Project description:E9.5 yolk sacs were collected from wild type (CD1) and Cdx-mutant (DKO) embryos and processed for RNA-sequencing to identify Cdx-dependent changes in gene expression

2022-02-01 | GSE181090 | GEO

Gene expression profiling of adult Drosophila melanogaster prickle-prickle mutant brains

Project description:Study of genome-wide differential gene expression of adult Drosophila melanogaster prickle-prickle mutant brains compared to control animals.

2023-07-10 | GSE155565 | GEO

Gene expression profiling of adult Drosophila melanogaster prickle-spiny legs mutant brains

Project description:Study of genome-wide differential gene expression of adult Drosophila melanogaster prickle-spiny legs mutant brains compared to control animals.

2023-03-01 | GSE154686 | GEO

Genome-wide analysis of trimethylation of lysine 27 of histone 3 (H3K27me3) in Drosophila melangoaster Myb mutant wing discs of 3rd instar larvae.

Project description:Study of genomic distribution of H3K27me3 in Drosophila melanogaster Myb mutant wing discs of 3rd instar larvae compared to control animals.

2020-03-12 | GSE100140 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data