Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bicyclus anynana

ABSTRACT: Transcriptomic atlas of Bicyclus anynana seasonal forms

PROVIDER: PRJNA844216 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR19571319_1.fastq.gz	Fastqsanger.gz
	SRR19571319_2.fastq.gz	Fastqsanger.gz
	SRR19571320_1.fastq.gz	Fastqsanger.gz
	SRR19571320_2.fastq.gz	Fastqsanger.gz
	SRR19571321_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 96

Similar Datasets

Bicyclus anynana RNA-Seq raw sequencing reads

Project description:Bicyclus anynana butterflies were reared at 17Â°C and 27Â°C to produce the dry and wet season forms. RNA was extracted using TRIzol from the heads of 12 individual animals ~0-3 hours after eclosing; 3 dry season females, 3 wet season females, 3 dry season males, and 3 wet season males. A TruSeq RNA Sample Preparation Kit v2 was used to make 12 double stranded cDNA libraries from polyadenylated RNA. We size selected for DNA at ~280-340 bp. Libraries were sequenced using a HiSeq 2500, paired end 100-cycle sequence run.

2015-10-01 | E-MTAB-3887 | biostudies-arrayexpress

Bicyclus anynana

Project description:Bicyclus anynana PstI RADseq

| PRJNA509697 | ENA

Bicyclus anynana

Project description:Bicyclus anynana Raw sequence reads

| PRJNA1309154 | ENA

Bicyclus anynana

Project description:Bicyclus anynana Transcriptome or Gene expression

| PRJNA544388 | ENA

Bicyclus anynana

Project description:Bicyclus anynana RNAseq Raw sequence reads

| PRJNA376691 | ENA

Bicyclus anynana

Project description:The eyespot transcriptome of Bicyclus anynana butterflies

| PRJNA398486 | ENA

Bicyclus anynana

Project description:Sequencing of the complete Bicyclus anynana genome

| PRJNA13891 | ENA

Bicyclus anynana

Project description:a wing EST project for the tropical butterfly Bicyclus anynana

| PRJNA18027 | ENA

Bicyclus anynana

Project description:The tropical butterfly Bicyclus anynana is a lepidopteran model organism

| PRJNA13881 | ENA

The molecular basis of scale development highlighted by a single-cell atlas of Bicyclus anynana butterfly pupal forewings

Project description:Butterfly wings display a diversity of cell types, including large polyploid scale cells, yet the molecular basis of such diversity is poorly understood. To explore scale cell diversity at a transcriptomic level, we employ single-cell RNA sequencing of ∼5,200 large cells (>6 μm) from 22.5- to 25-h male pupal forewings of the butterfly Bicyclus anynana. Using unsupervised clustering, followed by in situ hybridization, immunofluorescence, and CRISPR-Cas9 editing of candidate genes, we annotate various cell types on the wing. We identify genes marking non-innervated scale cells, pheromone-producing glandular cells, and innervated sensory cell types. We show that senseless, a zinc-finger transcription factor, and HR38, a hormone receptor, determine the identity, size, and color of different scale cell types and are important regulators of scale cell differentiation. This dataset and the identification of various wing cell-type markers provide a foundation to compare and explore scale cell-type diversification across arthropod species.

2024-04-25 | GSE241536 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data