Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Changes in gut microbiota composition associated with the presence of enteric protist Blastocystis in captive forest musk deer (Moschus berezovskii)

PROVIDER: PRJNA850511 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR19746037.fastq.gz	Fastqsanger.gz
	SRR19746038.fastq.gz	Fastqsanger.gz
	SRR19746039.fastq.gz	Fastqsanger.gz
	SRR19746040.fastq.gz	Fastqsanger.gz
	SRR19746041.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 29

Similar Datasets

Single-nucleus transcriptomics and chromatin accessibility analysis of musk gland in Chinese forest musk deer

Project description:The Chinese forest musk deer (FMD; Moschus berezovskii) is an endangered artiodactyl mammal. Musk secreted by the musk gland of male FMD has extremely high economic and medicinal value. At present, little is known about the development of musk glands and the molecular mechanism of musk secretion. In the present research, using snRNA-seq and snATAC-seq association analysis performed on musk glands of forest musk deer, coupled with several bioinformatics analyses, the dynamic transcriptional cell atlas of musk gland development was revealed and the genes and transcription factors affecting musk secretion were determined. Based on uniform manifold approximation and projection (UMAP) analysis, we identified 12 cell types from musk glands, including two different acinar cells (clusters 0 and 10). In addition, the expression of core target genes and core transcription factors was verified by fluorescence in situ hybridization and immunohistochemistry. Combined with weighted gene co-expression network analysis (WGCNA), we obtained a deeper biological understanding of the relationship between core transcription factors, differentially expressed genes and musk secretion related pathways. This study lays a foundation for improving musk yield and meeting market demand. In the meantime, it also contributes to reducing the hunting and poaching of wild forest musk deer, protecting forest musk deer resources and maintaining ecological balance.

2023-08-31 | GSE182087 | GEO

Transcriptome profiling of lung immune responses potentially related to acute respiratory distress syndrome in forest musk deer

Project description:ARDS-mediated lung transcriptome alterations were identified in forest musk deer. Moreover, multiple transcripts/genes involved in lung development and lung defense responses to bacteria/viruses/fungi in ARDS were filtered out in forest musk deer.

2022-10-19 | GSE191259 | GEO

Project description:Gut microbiota composition between captive and wild forest musk deer

| PRJNA394930 | ENA

Project description:microRNA and Other Small RNA Sequence Profiling Across Six Tissues of Chinese Forest Musk Deer (Moschus berezovskii)

| PRJNA541415 | ENA

Moschus berezovskii

Project description:Moschus berezovskii overview

| PRJNA289715 | ENA

Moschus berezovskii

Project description:Moschus berezovskii Metagenome

| PRJNA1266873 | ENA

Project description:Dietary supplementation with Epimedium contributes to the improvement of hormone levels, gut microbiota, and serum metabolite composition in the forest musk deer (Moschus berezovskii)

| PRJNA1195406 | ENA

Moschus berezovskii

Project description:Moschus berezovskii raw sequence reads

| PRJNA289641 | ENA

Moschus berezovskii

Project description:Moschus berezovskii Raw sequence reads

| PRJNA289642 | ENA

Moschus berezovskii

Project description:Moschus berezovskii Raw sequence reads

| PRJNA832264 | ENA