Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil metagenome

ABSTRACT: Grassland soil wet-up metagenomes and density fractionated metagenomes

PROVIDER: PRJNA856348 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR20011500_1.fastq.gz	Fastqsanger.gz
	SRR20011500_2.fastq.gz	Fastqsanger.gz
	SRR20011600_1.fastq.gz	Fastqsanger.gz
	SRR20011600_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 467

Similar Datasets

GNPS- Influence of drought and wet-up on the soil lipidome (PNNL Soils SFA)

Project description:Paper tentative title: Drought and wet-up causes significant remodeling of the soil lipidome Author list: Sneha Couvillion et al. We used lipidomics to capture the rapid metabolic response of the microbial community in an arid grassland soil to wet-up after a simulated drought.

2021-02-22 | MSV000086931 | GNPS

Mediterranean grassland soil C-N compound turnover is mediated by genomically novel organisms, depth stratified, and rainfall dependent

Project description:integrated soil metagenomics and metaproteomics to study grassland soil microbial communities

2019-03-27 | PXD013110 | Pride

Soil metagenome from avocado orchards in Channybearup, Western Australia in 2024

Project description:Metagenome data from soil samples were collected at 0 to 10cm deep from 2 avocado orchards in Channybearup, Western Australia, in 2024. Amplicon sequence variant (ASV) tables were constructed based on the DADA2 pipeline with default parameters.

2025-06-15 | GSE298403 | GEO

Antagonistic interactive effects of CO2 and nitrogen on microbial community enhance the persistence of soil C storage

Project description:To study long-term elevated CO2 and enriched N deposition interactive effects on microbial community and soil ecoprocess, here we investigated soil microbial community in a grassland ecosystem subjected to ambient CO2 (aCO2, 368 ppm), elevated CO2 (eCO2, 560 ppm), ambient nitrogen deposition (aN) or elevated nitrogen deposition (eN) treatments for a decade. There exist antagonistic CO2×N interactions on microbial functional genes associated with C, N, P S cycling processes. More strong antagonistic CO2×N interactions are observed on C degradation genes than other genes. Remarkably antagonistic CO2×N interactions on soil microbial communities could enhance soil C accumulation.

2018-05-01 | GSE98512 | GEO

soil metagenome

Project description:Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 1B metatranscriptome

| PRJNA410040 | ENA

soil metagenome

Project description:Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 6A metatranscriptome

| PRJNA410043 | ENA

soil metagenome

Project description:Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 4A metatranscriptome

| PRJNA410044 | ENA

soil metagenome

Project description:Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 5C metatranscriptome

| PRJNA410045 | ENA

soil metagenome

Project description:Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 6B metatranscriptome

| PRJNA410047 | ENA

soil metagenome

Project description:Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 4C metatranscriptome

| PRJNA410049 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data