Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Effect of melatonin on gene expression of Hepatocelluar Carcinoma HepG2 cells

ABSTRACT: Effect of melatonin on gene expression of Hepatocelluar Carcinoma HepG2 cells

PROVIDER: PRJNA863494 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR20707624_1.fastq.gz	Fastqsanger.gz
	SRR20707624_2.fastq.gz	Fastqsanger.gz
	SRR20707625_1.fastq.gz	Fastqsanger.gz
	SRR20707625_2.fastq.gz	Fastqsanger.gz
	SRR20707626_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Effect of melatonin on gene expression of Hepatocelluar Carcinoma HepG2 cells

Project description:To explore the role of melatonin in hepatocellular carcinoma,we performed high-throughput mRNA sequencing (mRNA-seq) with HepG2 cells treated with 1 mM melatonin for 24 h and 48 h separately. We then performed gene expression profiling analysis using data obtained from RNA-seq of HepG2 cells at two time points.

2022-09-08 | GSE210034 | GEO

Effect of SPARC on gene expression in HepG2

Project description:Effect of SPARC on gene expression in HepG2

| PRJNA704276 | ENA

Melatonin enhances plant growth and abiotic stress tolerance in soybean plants

Project description:Melatonin is a well-known agent that plays multiple roles in animals. Its possible function in plants is less clear. In the present study, we tested the effect of melatonin (N-acetyl-5-methoxytryptamine) on soybean growth and development. Both spraying of leaves and seed-coating with melatonin significantly promoted soybean growth as judged from leaf size and plant height. This enhancement was also observed in soybean production and their fatty acid content. Melatonin increased pod number, seed number and seed weight. However, the 100-seed weight was not influenced by melatonin application. Melatonin also improved soybean tolerance to salt and drought stresses. Transcriptome analysis revealed that melatonin up-regulated the expression of many genes and alleviated the inhibitory effects of salt stress on gene expressions. Further detailed analysis of the affected pathways documents that melatonin likely achieved its promotional roles in soybean through enhancement of genes involved in cell division, photosynthesis, carbohydrate metabolism, fatty acid biosynthesis and ascorbate metabolism. Our results demonstrate that melatonin has significant potential for improving of soybean growth and seed production. Further study should uncover more about the molecular mechanisms of melatoninM-bM-^@M-^Ys function in soybeans and other crops. Four different treatments were chosen, water, salt, 100M-BM-5M melatonin and salt plus 100M-BM-5M melatonin. The comparison of salt/melatonin-treated sample versus water-treated sample reveals salt or melatonin induced transcriptome changes. The comparison of melatonin plus salt treated sample versus salt-treated sample reveals melatonin induced changes when salt exists.

2014-08-31 | E-GEOD-57960 | biostudies-arrayexpress

Effect of ZFP740 knockdown on HepG2 cells

Project description:To investigate the effect of ZFP740 gene expression on hepatocellular carcinoma cells, we used the hepatocellular carcinoma cell line HepG2, and then divided into two groups, in which the control group was HepG2, and the intervention group was HepG2 with the knockdown of the ZNF740 gene, and three samples were sent to each group for RNA seq sequencing

2024-07-04 | GSE268479 | GEO

Expression analysis of HepG2, HepG2-slug and HepG2-slug on Matrigel

Project description:Investigation of whole genome gene expression level changes in hepatocellular carcinoma cell line hepG2 in regular culture, hepG2-slug in regular culture and hepG2-slug on Matrigel. Whole genome gene expression level changes have been compared in hepatocellular carcinoma cell line hepG2 in regular culture, hepG2-slug in regular culture and hepG2-slug on Matrigel. Roche NimbleGen micro-array analysis was employed to assess global genome expression in HepG2 in regular culture, HepG2-slug in regular culture and HepG2-slug on Matrigel. The results demonstrated that the up-regulated genes and the down-regulated genes increased significantly when HepG2-slug cells with VM forming ablity were cultured on Matrigel and formed VM.

2012-09-21 | E-GEOD-41026 | biostudies-arrayexpress

Time-course effect of APRIL on gene expression in HepG2 cells

Project description:APRIL (TNFSF13) is a ligand of the TNF superfamily which binds to two receptors, BCMA and TACI. We have found that APRIL and its receptor BCMA are specifically enhanced in hepatocellular carcinoma, as compared to non-cancerous liver tissue. We further identified that HepG2 cells present the same ligand/receptor pattern as human hepatocellular carcinomas. We investigated the role of APRIL in HepG2 gene expression in a time course study. 24 hour serum starved HepG2 cells were treated with 200ng/ml of APRIL and RNA was collected at 0, 2, 6, and 12h. The collected RNA was used for hybridization on commercially available Affymetrix Human Genome U133 Plus 2.0 Arrays

2011-05-20 | E-GEOD-29375 | biostudies-arrayexpress

Melatonin affects endothelial cells-derived exosomal miRNA expression

Project description:The proper response to shear stress involves multiple cell components of the vascular wall including endothelial cells (ECs), smooth muscle cells (SMCs), and the intercellular communications between them. Mounting evidence indicates that retinoid acid receptor-related orphan receptor-α (RORα) mediates many biological activities of melatonin including transactivation of transcriptional factors, and anti-inflammation. In this study we investigated the effect of melatonin on endothelial cells-derived exosomal miRNA expression. We used microarrays to detail the global program of gene expression underlying melatonin treatment and identified distinct classes of dys-regulated genes during this process.

2020-10-20 | GSE159641 | GEO

Effect of knockdown of KIAA1429 on gene expression in HepG2 cells

Project description:Effect of knockdown of KIAA1429 on gene expression in HepG2 cells

| PRJNA985622 | ENA

Effect of STAT3 deletion on gene expression in HepG2 cell line

Project description:Effect of STAT3 deletion on gene expression in HepG2 cell line

| PRJNA832212 | ENA

Effects of CREB5 overexpression on gene expression in Hepatocellular Carcinoma HepG2 cells

Project description:Effects of CREB5 overexpression on gene expression in Hepatocellular Carcinoma HepG2 cells

| PRJNA1180522 | ENA