Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bemisia tabaci

ABSTRACT: Analysis of transcriptome dynamics in the B biotype Bemisia tabaci (the Middle East-Asia Minor 1) between the different host and sex strains Transcriptome or Gene expression

PROVIDER: PRJNA89143 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR453538_1.fastq.gz	Fastqsanger.gz
	SRR453538_2.fastq.gz	Fastqsanger.gz
	SRR453539_1.fastq.gz	Fastqsanger.gz
	SRR453539_2.fastq.gz	Fastqsanger.gz
	SRR453540_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Proteomics analysis of Bemisia tabaci (MED) saliva

Project description:The saliva from Bemisia tabaci (MED biotype) adults was collected using an artificial feeding system and analyzed using an LC-MS/MS proteomics analysis.

2024-01-26 | PXD033180 | Pride

Bemisia tabaci isolate:Middle East-Asia Minor 1

Project description:Bemisia tabaci isolate:Middle East-Asia Minor 1 Raw sequence reads

| PRJNA802232 | ENA

Bemisia tabaci B and Q biotypes thermotolerance

Project description:The whitefly Bemisia tabaci (Gennadius) causes tremendous losses to agriculture by direct feeding on plants and by vectoring several families of plant viruses. The B. tabaci species complex comprises over 10 genetic groups (biotypes) that are well defined by DNA markers and biological characteristics. B and Q are amongst the most dominant and damaging biotypes, differing considerably in fecundity, host range, insecticide resistance, virus vectoriality, and the symbiotic bacteria they harbor. We used a spotted B. tabaci cDNA microarray to compare the expression patterns of 6,000 ESTs of B and Q biotypes under standard 25°C regime and heat stress at 40°C. Overall, the number of genes affected by increasing temperature in the two biotypes was similar. Gene expression under 25ºC normal rearing temperature showed clear differences between the two biotypes: B exhibited higher expression of mitochondrial genes, and lower cytoskeleton, heat-shock and stress-related genes, compared to Q. Exposing B-biotype whiteflies to heat stress was accompanied by rapid alteration of gene expression. For the first time, the results here present differences in gene expression between very closely related and sympatric B. tabaci biotypes, and suggest that these clear-cut differences are due to better adaptation of one biotype over another and might eventually lead to changes in the local and global distribution of both biotypes.

2009-08-13 | GSE17567 | GEO

Bemisia tabaci B and Q biotypes thermotolerance

2009-08-13 | E-GEOD-17567 | biostudies-arrayexpress

Global analysis of the transcriptional difference between indigenous and invasive whiteflies reveals the possible mechanism of whitefly invasion

Project description:The whitefly Bemisa tabaci is a species complex of more than 31 cryptic species which include some of the most destructive invasive pests of many ornamental and glasshouse crops worldwide. Among them, Middle East-Asia Minor 1 (herein MEAM1) and Mediterranean (herein MED) have invaded many countries around the world and displaced the native whitefly species. However, the molecular differences between invasive and indigenous whiteflies remain largely unknown. The global transcriptional difference between the two invasive whitefly Bemisia tabaci species (MEAM1, MED) and one indigenous whitefly species (Asia II 3) were analyzed using the Illumina sequencing technology.

2013-11-24 | E-GEOD-41864 | biostudies-arrayexpress

Transcriptional responses of an indigenous and an invasive whitefly to different host plants reveal their different capacity of adaptation

Project description:The whitefly Bemisa tabaci is a species complex with global distribution and extensive genetic diversity. In this species complex, Middle East-Asia Minor 1 (MEAM1, previously referred to as the ‘B biotype’) species has been spreading rapidly in tropical and subtropical regions. we analyzed the transcriptional responses of the invasive MEAM1 and the indigenous Asia II 3 species of B. tabaci complex during host plant shift (from cotton to tobacco) using the Illumina sequencing technology.The different gene expression pattern of energy and carbonhydrate metabolism and detoxification metabolism between MEAM1 and Asia II 3 were the main reasons of their different capacity of adapation.

2016-01-01 | GSE57074 | GEO

Bemisia tabaci

Project description:Bemisia tabaci B biotype bacteriocyte transcriptome

| PRJNA255988 | ENA

Transcriptional responses of an indigenous and an invasive whitefly to different host plants reveal their different capacity of adaptation

Project description:The whitefly Bemisa tabaci is a species complex with global distribution and extensive genetic diversity. In this species complex, Middle East-Asia Minor 1 (MEAM1, previously referred to as the âB biotypeâ) species has been spreading rapidly in tropical and subtropical regions. we analyzed the transcriptional responses of the invasive MEAM1 and the indigenous Asia II 3 species of B. tabaci complex during host plant shift (from cotton to tobacco) using the Illumina sequencing technology.The different gene expression pattern of energy and carbonhydrate metabolism and detoxification metabolism between MEAM1 and Asia II 3 were the main reasons of their different capacity of adapation. The global transcriptional difference between the invasive whitefly Bemisia tabaci species (MEAM1) and the indigenous whitefly species (Asia II 3) on cotton and tobacco were analyzed using the Illumina sequencing technology.

2016-07-03 | E-GEOD-57074 | biostudies-arrayexpress

Identification of miRNAs and their target genes in Bemisia tabaci when feeding on Nicotiana tabacum plants

Project description:The study aims to identify and analyze the miRNAs in Bemisia tabaci that feed on Nicotiana tabacum cv. NC89 plants. This allows for the investigation of insect miRNAs that play important physiological roles in Bemisia tabaci. Additionally, it enables the analysis and identification of miRNAs that are transferred from Nicotiana tabacum to Bemisia tabaci. These data can further help us understand the role of miRNAs in the interaction between Bemisia tabaci and its host plants.

2025-03-29 | GSE292778 | GEO

Transcriptome profiling of Bemisia tabaci reveals stage-specific gene expression signatures for thiamethoxam resistance

Project description:To investigated the stage-specific gene expression response to thiamethoxam in the Bemisia tabaci, we have designed the Agilent eArray platform to identify stage-regulated gene expression towards thiamethoxam exposure. All the B biotype Bemisia tabaci were maintained on cabbage. Thiamethoxam susceptible (TH-S) was cultured without exposure to any chemical insecticides, Thiamethoxam resistance (TH-R) strain exhibited >70-fold resistance to thiamethoxam in comparision to the TH-S strain. Eggs were incubated in 24hours collected as one sample. The fourth nymphs were collected as another sample. The one-day-old unmated adult females were collected as the third samples. Both of the samples were collected from the TH-R, TH-S strains, respectively

2013-11-01 | E-GEOD-42337 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data