Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1 [ChIP-seq]

ABSTRACT: SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1 [ChIP-seq]

PROVIDER: PRJNA902334 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22311700.fastq.gz	Fastqsanger.gz
	SRR22311701.fastq.gz	Fastqsanger.gz
	SRR22311702.fastq.gz	Fastqsanger.gz
	SRR22311703.fastq.gz	Fastqsanger.gz
	SRR22311704.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1 [ChIP-seq]

Project description:We recently reported that in prostate cancer LSD1 can demethylate the lysine 270 of FOXA1 to stabilize FOXA1 chromatin binding and thus can enhance the activities of AR and other transcription factors that require FOXA1 as a pioneer factor. However, the methyltransferase that can methylate FOXA1 and negatively regulate the LSD1-FOXA1 oncogenic axis remains unknown. SETD7 is initially identified as a transcriptional activator through methylating histone 3 lysine 4 but can also function as a methyltransferase on other non-histone substrates. However, its function in PCa remains poorly understood. In this study, we found that SETD7 confers tumor suppressor activity in PCa cells and that loss of SETD7 expression is significantly associated with PCa progression and tumor aggressiveness. Mechanistically, we found that SETD7 primarily acts as a transcriptional repressor in CRPC cells by functioning as a methyltransferase of FOXA1-K270 to disrupt FOXA1-mediated transcription. Overall, our study provides novel mechanistic insights into the tumor-suppressive and transcriptional repression activities of SETD7 in mediating PCa progression and therapy resistance.

2023-08-23 | GSE218092 | GEO

SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1

Project description:SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1

| PRJNA902327 | ENA

SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1 [RNA-seq]

Project description:SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1 [RNA-seq]

| PRJNA902336 | ENA

SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1 [RNA-seq]

Project description:To determine the transcriptional impact of SETD7,MLL1 silencing in CRPC cells, we performed an RNA-seq analysis in those 22Rv1 stable cell lines (under hormone-depleted conditions)

2023-08-23 | GSE218093 | GEO

SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1.

Project description:Dysregulation of histone lysine methyltransferases and demethylases is one of the major mechanisms driving the epigenetic reprogramming of transcriptional networks in castration-resistant prostate cancer (CRPC). In addition to their canonical histone targets, some of these factors can modify critical transcription factors, further impacting oncogenic transcription programs. Our recent report demonstrated that LSD1 can demethylate the lysine 270 of FOXA1 in prostate cancer (PCa) cells, leading to the stabilization of FOXA1 chromatin binding. This process enhances the activities of the androgen receptor and other transcription factors that rely on FOXA1 as a pioneer factor. However, the identity of the methyltransferase responsible for FOXA1 methylation and negative regulation of the FOXA1-LSD1 oncogenic axis remains unknown. SETD7 was initially identified as a transcriptional activator through its methylation of histone 3 lysine 4, but its function as a methyltransferase on nonhistone substrates remains poorly understood, particularly in the context of PCa progression. In this study, we reveal that SETD7 primarily acts as a transcriptional repressor in CRPC cells by functioning as the major methyltransferase targeting FOXA1-K270. This methylation disrupts FOXA1-mediated transcription. Consistent with its molecular function, we found that SETD7 confers tumor suppressor activity in PCa cells. Moreover, loss of SETD7 expression is significantly associated with PCa progression and tumor aggressiveness. Overall, our study provides mechanistic insights into the tumor-suppressive and transcriptional repression activities of SETD7 in mediating PCa progression and therapy resistance.

| S-EPMC10438836 | biostudies-literature

SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1

Project description:This SuperSeries is composed of the SubSeries listed below.

2023-08-23 | GSE218094 | GEO

Global analysis of methylation by SETD7 in the MM genome

Project description:We analyzed methylation by SETD7 in multiple myeloma using ChIP-seq.

2025-08-15 | GSE304199 | GEO

Essential Roles of SETD7 as Transcriptional Activator and Co-regulator of H3K36me in Cardiac Lineage Commitment

Project description:Coordinated epigenome alteration is fundamental for cardiac development. However, the precise mechanisms by which epigenetic modifying enzymes regulate cardiac development are still unclear. Here we identify SET domain containing protein 7 (SETD7) as a key regulator of cardiac differentiation. ChIP-seq reveals that SETD7 has distinct groups of target genes and regulates its stage-specific expression during cardiomyocyte differentiation, which is crucial for lineage commitment. We find SETD7 associates with stage-specific co-factors, such as SWI/SNF chromatin remodeling factors during mesodermal formation and transcription factor NKX2-5 in cardiac progenitor differentiation. Cross-analysis of epigenetic modifications shows that SETD7 recognizes and binds with active histone marker H3K36 methylation on gene-body region of its target genes. We further demonstrate SETD7 is required for functional properties of terminally differentiated cardiomyocytes. Together, our results suggest unidentified roles of SETD7 in cardiac lineage commitment and provide new insights into the crosstalk between epigenetic dynamics and epigenetic modifying enzymes.

2018-04-17 | GSE107785 | GEO

SETD7 promotes lateral plate mesoderm formation by modulating the Wnt/b-catenin signaling pathway

Project description:Investigating the role of SETD7 during human hematopoietic development

2023-09-11 | GSE228287 | GEO

Separation of transcriptional repressor and activator functions in HDAC3

Project description:Separation of transcriptional repressor and activator functions in HDAC3

| PRJNA849800 | ENA