Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Effect of depletion of A3B on gene expression of 92.1 cells and overexpression of A3B on gene expression of MEL290 cells

ABSTRACT: Effect of depletion of A3B on gene expression of 92.1 cells and overexpression of A3B on gene expression of MEL290 cells

PROVIDER: PRJNA905401 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22408342_1.fastq.gz	Fastqsanger.gz
	SRR22408342_2.fastq.gz	Fastqsanger.gz
	SRR22408343_1.fastq.gz	Fastqsanger.gz
	SRR22408343_2.fastq.gz	Fastqsanger.gz
	SRR22408344_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Effect of depletion of A3B on gene expression of 92.1 cells and overexpression of A3B on gene expression of MEL290 cells

Project description:To investigate the function of A3B, we established 92.1 cell lines with A3B knocked down and MEL290 cell lines with A3B overexpression. We then performed gene expression profiling analysis using data obtained from RNA-seq of 4 different cell lines with two replicates.

2023-06-07 | GSE218751 | GEO

Decoding the Genes that A3B regulated

Project description:Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for A3B in OMM2.3 and 92.1 cells.

2023-06-07 | GSE218753 | GEO

Transcriptome analysis of 92.1-parental and 92.1-resistant uveal melanoma cells

Project description:To study the mechanism of cisplatin resistance in uveal melanoma, we performed RNA-seq of 92.1-parental and 92.1-resistant uveal melanoma cells.

2026-01-01 | GSE271497 | GEO

H3K9ac and H3K27ac analysis of 92.1-parental and 92.1-resistant uveal melanoma cells

Project description:To study the mechanism of cisplatin resistance in uveal melanoma, we performed H3K9ac and H3K27ac Cut&Tag in 92.1-parental and 92.1-resistant uveal melanoma cells.

2026-01-01 | GSE271539 | GEO

Transcriptome analysis of 92.1-parental and 92.1-resistant uveal melanoma cells

Project description:Transcriptome analysis of 92.1-parental and 92.1-resistant uveal melanoma cells

| PRJNA1131825 | ENA

Quantitative proteomic analysis of whole protein in three melanoma samples of 92.1, 92.1-A and 92.1-B

Project description:A total of 6081 proteins were identified in this study, of which 5267 proteins contained quantitative information. If taking 1.2 times as the change threshold and t-test p-value < 0.05 as the standard, the expression of 335 proteins in 92.1-a / 92.1 comparison group was up-regulated and 302 proteins were down regulated; In the 92.1-b / 92.1 comparison group, 129 proteins were up-regulated and 160 proteins were down regulated. Based on the above data, we conducted a systematic bioinformatics analysis of proteins containing quantitative information, including protein annotation, functional classification, functional enrichment and cluster analysis based on functional enrichment. It provides a comprehensive reference for the downstream proteome research.

2022-03-21 | PXD032215 | Pride

H3K9ac and H3K27ac analysis of 92.1-parental and 92.1-resistant uveal melanoma cells

Project description:H3K9ac and H3K27ac analysis of 92.1-parental and 92.1-resistant uveal melanoma cells

| PRJNA1132184 | ENA

Global expression analysis of BAP1 knockdown in transfected 92.1 cells

Project description:Analysis of the effect that reduced BAP1 levels have on global gene expression.The hypothesis tested was that reduction in BAP1 levels would produce changes in gene expression similar to changes observed in class 2 uveal melanomas. Data provided insight into genes that are disrupted with reduced BAP1 levels. Total RNA was isolated from 92.1 cells transfected with either control or BAP1 knockdown constructs for global expression analysis.

2011-01-06 | E-GEOD-24896 | biostudies-arrayexpress

Decoding the Genomic regions that R-loop distributed associated with A3B expression

Project description:R-loop CUT&Tag in OMM2.3 cells with A3B knocked down

2023-06-07 | GSE218754 | GEO

RNA-seq analysis in uveal melanoma cells 92.1 and OMM1

Project description:RNA-seq analysis in uveal melanoma cells 92.1 and OMM1

| PRJNA765665 | ENA