Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Intestinal muscous and chyme microbiota in turbot Scophthalmus maximus

PROVIDER: PRJNA907978 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22536600_1.fastq.gz	Fastqsanger.gz
	SRR22536600_2.fastq.gz	Fastqsanger.gz
	SRR22536601_1.fastq.gz	Fastqsanger.gz
	SRR22536601_2.fastq.gz	Fastqsanger.gz
	SRR22536602_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 190

Similar Datasets

β-glucan alleviates infective intestinal inflammation via activating Th17 cells in a teleost fish

Project description:We established a bacteria infective intestinal inflammation in turbot (Scophthalmus maximus). And found that β-glucan could significantly alleviate the phenotype of turbot intestinal inflammation. We performed single cell transcriptome analysis to study bacteria infective intestinal inflammation and the effects of β-glucan. Furthermore, we revealed that β-glucan through activates Th17 cells to alleviate intestinal inflammation in turbot.

2023-12-31 | GSE238068 | GEO

LD PROTEOMICS WITH TURBOT INFECTED BY EIB202

Project description:To investigate the impact of pathogenic immune stimulation on the lipid droplet (LD) proteome of turbot (Scophthalmus maximus), turbot were intraperitoneally injected with PBS (XA01292LQ_P), wild-type Edwardsiella piscicida EIB202 (XA01292LQ_W), or inactivated E. piscicida EIB202 (XA01292LQ_T). Liver tissues were collected, and LDs were extracted for 4D label-free quantitative proteomics analysis.

2024-11-21 | PXD047605 | Pride

fScoMax

Project description:Scophthalmus maximus (turbot)

| PRJEB69510 | ENA

Single-Cell Transcriptomic Analysis Reveals Neutrophil as Orchestrator during β-Glucan-Induced Trained Immunity in a Teleost Fish

Project description:We establish a trained immunity activation model in turbot (Scophthalmus maximus) by training with β-glucan in vivo. Through single cell RNA-sequencing analysis, we annotate 16 clusters of immune cells and blood cells from head kidney and spleen, and successfully characterize that neutrophils exhibit distinguished feature of trained immunity.

2022-06-01 | GSE195628 | GEO

Project description:Gut microbiota sequencing of turbot (Scophthalmus maximus)

| PRJNA1159012 | ENA

Project description:Transcriptome of turbot (Scophthalmus maximus)

| PRJNA1118073 | ENA

Use of an immune-specific microarray for identifying transcriptome profiles associated to VHSV infection or vaccination with a G gene- DNA vaccine in turbot (Scophthalmus maximus)

Project description:With the aim of shedding light on the protection conferred by the DNA vaccines based in the G glycoprotein of viral haemorrhagic septicaemia virus (VHSV) in turbot (Scophthalmus maximus) we have used a specific microarray highly enriched in antiviral sequences to carry out the transcriptomic study associated to VHSV DNA vaccination/infection. The differential gene expression pattern in response to empty plasmid (pMCV1.4) and DNA vaccine (pMCV1.4-G860) intramuscular administration with regard to non-stimulated turbot was analyzed in head kidney at 8, 24 and 72 hours post-vaccination. Moreover, the effect of VHSV infection one month after immunization was also analyzed in vaccinated and non-vaccinated fish at the same time points.

2015-04-01 | GSE56487 | GEO

fScoMax1

Project description:Scophthalmus maximus (turbot) genome assembly, fScoMax1

| PRJEB70830 | ENA

fish metagenome

Project description:Ocular Microbiota of Exophthalmic Disease in Farmed Turbot (Scophthalmus maximus)

| PRJNA592217 | ENA

Project description:trancriptomic analyses of the turbot Scophthalmus maximus

| PRJNA352308 | ENA