Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Jarid2 cKO CUT&RUN]

ABSTRACT: Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Jarid2 cKO CUT&RUN]

PROVIDER: PRJNA924280 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23091970_1.fastq.gz	Fastqsanger.gz
	SRR23091970_2.fastq.gz	Fastqsanger.gz
	SRR23091971_1.fastq.gz	Fastqsanger.gz
	SRR23091971_2.fastq.gz	Fastqsanger.gz
	SRR23091972_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 44

Similar Datasets

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Jarid2 cKO CUT&RUN]

Project description:Transitions in competence underlie the ability of CNS progenitors to generate a diversity of neurons and glia. Retinal progenitor cells in mouse generate early-born cell types embryonically and late-born cell types largely postnatally. We find that the transition from early to late progenitor competence is regulated by Jarid2. Loss of Jarid2 results in extended production of early cell types and extended expression of early progenitor genes. Jarid2 can regulate histone modifications, and we find reduction of repressive mark H3K27me3 on a subset of early progenitor genes with loss of Jarid2, most notably Foxp1. We show that Foxp1 regulates the competence to generate early-born retinal cell types, promotes early and represses late progenitor gene expression, and is required for extending early retinal cell production after loss of Jarid2. We conclude Jarid2 facilitates progression of retinal progenitor temporal identity by repressing Foxp1, which is a primary regulator of early temporal patterning.

2023-02-15 | GSE222955 | GEO

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Foxp1 cKO bulk RNA-seq]

2023-02-15 | GSE202725 | GEO

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Jarid2 scRNA-Seq]

2023-02-15 | GSE202734 | GEO

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Foxp1 cTG scRNA-seq]

2023-02-15 | GSE222956 | GEO

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Foxp1 cKO bulk RNA-seq]

Project description:Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Foxp1 cKO bulk RNA-seq]

| PRJNA837182 | ENA

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [H3K27me3 CUT&RUN E14.5 and P0]

2023-02-15 | GSE202728 | GEO

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Jarid2 scRNA-Seq]

Project description:Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Jarid2 scRNA-Seq]

| PRJNA837191 | ENA

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1

Project description:Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1

| PRJNA837193 | ENA

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Foxp1 cTG scRNA-seq]

Project description:Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1 [Foxp1 cTG scRNA-seq]

| PRJNA924281 | ENA

Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1.

Project description:Transitions in competence underlie the ability of CNS progenitors to generate a diversity of neurons and glia. Retinal progenitor cells in mouse generate early-born cell types embryonically and late-born cell types largely postnatally. We find that the transition from early to late progenitor competence is regulated by Jarid2. Loss of Jarid2 results in extended production of early cell types and extended expression of early progenitor genes. Jarid2 can regulate histone modifications, and we find reduction of repressive mark H3K27me3 on a subset of early progenitor genes with loss of Jarid2, most notably Foxp1. We show that Foxp1 regulates the competence to generate early-born retinal cell types, promotes early and represses late progenitor gene expression, and is required for extending early retinal cell production after loss of Jarid2. We conclude that Jarid2 facilitates progression of retinal progenitor temporal identity by repressing Foxp1, which is a primary regulator of early temporal patterning.

| S-EPMC10210259 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data