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Generation of three-dimensional meat-like tissue from stable pig epiblast stem cells

ABSTRACT: Generation of three-dimensional meat-like tissue from stable pig epiblast stem cells

PROVIDER: PRJNA926312 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR23185318_1.fastq.gz	Fastqsanger.gz
	SRR23185318_2.fastq.gz	Fastqsanger.gz
	SRR23185319_1.fastq.gz	Fastqsanger.gz
	SRR23185319_2.fastq.gz	Fastqsanger.gz
	SRR23185320_1.fastq.gz	Fastqsanger.gz

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Generation of three-dimensional meat-like tissue from stable pig epiblast stem cells.

Project description:Cultured meat production has emerged as a breakthrough technology for the global food industry with the potential to reduce challenges associated with environmental sustainability, global public health, animal welfare, and competition for food between humans and animals. The muscle stem cell lines currently used for cultured meat cannot be passaged in vitro for extended periods of time. Here, we develop a directional differentiation system of porcine pre-gastrulation epiblast stem cells (pgEpiSCs) with stable cellular features and achieve serum-free myogenic differentiation of the pgEpiSCs. We show that the pgEpiSCs-derived skeletal muscle progenitor cells and skeletal muscle fibers have typical muscle cell characteristics and display skeletal muscle transcriptional features during myogenic differentiation. Importantly, we establish a three-dimensional differentiation system for shaping cultured tissue by screening plant-based edible scaffolds of non-animal origin, followed by the generation of pgEpiSCs-derived cultured meat. These advances provide a technical approach for the development of cultured meat.

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Generation of three-dimensional meat-like tissue from stable pig epiblast stem cells

Project description:We performed RNA-seq using pgEpiSCs at passage 30 (P30) and at P200 to further comprehensively assess the cellular properties. We subsequently employed the RNA-Seq dataset to focused on the expression level profiles of marker genes known to be involved in critical phases of myogenic lineage differentiation to determine if the differentiation scheme generates cells of the expected lineage at each stage.

2023-10-22 | GSE223433 | GEO

Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines

Project description:Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines

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Three-dimensional chromatin interactions remain stable upon CAG/CTG repeat expansion

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Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [HiC]

Project description:Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [HiC]

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Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [RNA-seq]

Project description:Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [RNA-seq]

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Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [ChIP-seq]

Project description:Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [ChIP-seq]

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De novo formation of apical-basal polarity by Rap1 regulates epiblast patterning

Project description:The epiblast is the first cell type that forms apical-basal polarity de novo as the mouse embryo implants into the maternal uterus, while the extraembryonic neighbours of the epiblast - trophectoderm and primitive endoderm - retain their pre-established polarity beyond implantation [1]; however, it is still unclear how the epiblast establishes apical-basal polarity de novo. Here, we focused on Rap1 signaling pathway, which is activated during the transition of the epiblast from the naïve to primed state of pluripotency during implantation [2]. Through the preestablished in vitro three-dimensional culture system [3], genetic knockouts and proximity-biotinylation analyses, we found that Rap1 integrates multiple signals that contribute to de novo formation of apical-basal polarity. Importantly, formation of apical-basal polarity in the epiblast is essential for its correct patterning and proper communication with the extraembryonic lineages. Altogether, these results not only dissect molecular details of de novo apical-basal polarity formation, but also have broader implications for epithelial polarity and development.

2022-06-14 | PXD028315 | Pride

Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [single-cell RNA-seq]

Project description:Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [single-cell RNA-seq]

| PRJNA706353 | ENA

Generation and Characterization of Stable Pig Pre-gastrulation Epiblast Stem Cell Lines [HiC]

Project description:Despite ongoing attempts since the 1990s, no stable embryonic stem cell line has been established in pigs. Here, guided by insights from large-scale single-cell RNA-sequencing profiling of pig embryos from embryonic day (E) 0 to E14, we developed an in vitro culture system for establishing and maintaining stable pluripotent stem cell lines from pig E10 pre-gastrulation epiblasts (pgEpiSCs). Enabled by chemical inhibition of WNT-related signaling in culture, the pgEpiSCs maintain their pluripotency and normal karyotypes after more than 200 passages. Strikingly, ultra-deep in situ Hi-C analysis revealed functional impacts of 3D-spatial associations on the transcriptional regulation of pluripotency marker genes in the pgEpiSCs. Practically, we confirmed that the pgEpiSCs can readily tolerate at least three rounds of successive gene editing and generated cloned gene-edited live piglets. Our findings deliver on the long-anticipated promise of large model animal stem cells and open new avenues for biological research, animal husbandry, and biomedicine.

2023-12-13 | GSE168104 | GEO

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