Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Theonella sp. metagenome

ABSTRACT: Theonella sp. metagenome Raw sequence reads

PROVIDER: PRJNA929093 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23265713_1.fastq.gz	Fastqsanger.gz
	SRR23265713_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Theonella sp. metagenome

Project description:Theonella sp. metagenome Raw sequence reads

| PRJNA928229 | ENA

Theonella sp. metagenome

Project description:Theonella sp. metagenomic seq raw sequence reads

| PRJNA928504 | ENA

Soil metagenome from avocado orchards in Channybearup, Western Australia in 2024

Project description:Metagenome data from soil samples were collected at 0 to 10cm deep from 2 avocado orchards in Channybearup, Western Australia, in 2024. Amplicon sequence variant (ASV) tables were constructed based on the DADA2 pipeline with default parameters.

2025-06-15 | GSE298403 | GEO

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

Project description:WTCCC2 project Schizophrenia (SP) samples

| EGAD00010000262 | EGA

Acarnus sp. metagenome

Project description:Acarnus sp. metagenome Raw sequence reads

| PRJNA928571 | ENA

Manihinea sp. metagenome

Project description:Manihinea sp. metagenome Raw sequence reads

| PRJNA928219 | ENA

RNA-seq based transcriptome of Nesterenkonia sp. AN1

Project description:The transcript profiles of Nesterenkonia sp. AN1 grown at 5 ºC (Cold) and 21 ºC (Topt) were acccessed to evaluate the cold reposnse of this Antarctic Nesterenkonia strain. The strain was grown in triplicates at the optimum growth temperature of 21 ºC and a test temperature of 5 ºC. Total RNA was extracted from two replicate samples for each treatment condition and the total RNA was enriched for mRNA. RNA-seq was done using Illumina Miseq platform at Inqaba Biotech, South Africa. The reads were mapped against the genome sequence of Nesterenkonia sp. AN1 (obtained from NCBI database) and assesed for differeential gene expression using CLC Genomics Workbench 7.5.

2015-07-22 | GSE71132 | GEO

Four groups of distinct lung microbiota in pulmonary diseases

Project description:Metagenome sequencing All specimens were collected and immediately stored in a -80 freezer. All BALF samples were subjected to MS. DNA was extracted from BALF using the TIANamp Micro DNA kit (DP316, Tiangen Biotech). DNA libraries were constructed with the end-repair method and then sequenced on the BGI Sequencer platform (BGI Genomics, Shenzhen, China). Bioinformatic pipeline analysis Low-quality and short (<35 bp) reads were removed from raw data using fastp [10]. Remaining reads were mapped to the human reference genome (hg19) using the Burrows-Wheeler method to remove sequences of human origin. Filtered reads were classified with RefSeq, downloaded from NCBI (ftp://ftp.ncbi.nlm.nih.gov/genomes/).

2026-06-30 | E-MTAB-15179 | biostudies-arrayexpress

RNA-seq based transcriptome of Nesterenkonia sp. AN1

2015-07-22 | E-GEOD-71132 | biostudies-arrayexpress