Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Study of microbial diversity on cecal contents

PROVIDER: PRJNA947554 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23968405_1.fastq.gz	Fastqsanger.gz
	SRR23968405_2.fastq.gz	Fastqsanger.gz
	SRR23968406_1.fastq.gz	Fastqsanger.gz
	SRR23968406_2.fastq.gz	Fastqsanger.gz
	SRR23968407_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

Gallus gallus breed:Leghorn

Project description:Microbial diversity on chicks cecal contents

| PRJNA655191 | ENA

Project description:Microbial community diversity of broiler cecal contents

| PRJNA750333 | ENA

Project description:Microbial diversity of cecal contents in broilers

| PRJNA770158 | ENA

Project description:Microbial diversity on cecal contents of broilers

| PRJNA1238552 | ENA

16S rRNA sequencing of cecal microbiota from neonatal mice pre- and post-weaning

Project description:Neonatal mice were susceptible to cryptosporidium infection at 1- and 2-weeks of age, but were resistant to infection at 3- and 6-weeks of age. Diet and microbial changes are known to occur during the weaning transition in mice and we hypothesized that these changes in the intestinal luminal environment might influence resistance and susceptibility to cryptosporidium infection. As one part of testing this hypothesis, cecal microbiota composition was determined by 16S ribosomal RNA sequencing of DNA isolated from the cecal contents of mice at 1 week, 2 weeks, 3 weeks, and 6 weeks of age.

2020-11-03 | E-MTAB-9100 | biostudies-arrayexpress

Project description:Microbial diversity of cecal contents in C57 mice

| PRJNA1230777 | ENA

Project description:bacterial microbial diversity in cecal contents of mice

| PRJNA1079215 | ENA

Project description:Diversity sequencing of cecal contents

| PRJNA846737 | ENA

Microbial study on rabbit cecal contents

Project description:Microbial study on rabbit cecal contents Raw sequence reads

| PRJNA527918 | ENA

Whole rye consumption improves blood and liver n-3 fatty acid profile and gut microbiota composition in rats

Project description:This study in rats was designed to investigate whether whole rhye (WR) can influence the metabolism of n-3 and n-6 long-chain fatty acids (LCFA) and gut microbiota composition. For 12 weeks, rats were fed a diet containing either 50% WR or 50% refined rye (RR). Total bacterial DNA was extracted from fecal and cecal samples (n=5 per group). 16S PCR amplification was performed to assess the microbial diversity at the family level using the HuGChip. Amplified DNA was purified and labelled with either Cy3 or Cy5 dye and hybridized on the microarray. A 15 chip study was realized, each corresponding to hybridization with 250ng of labelled 16S rRNA gene amplicons from either mice fecal and cecal samples. Each probe (4441) was synthetized in three replicates.

2015-08-06 | E-GEOD-71726 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data