Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genomic Profiling of Adenomatous Goitre using Next Generation Sequencing

PROVIDER: PRJNA950074 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24008061_1.fastq.gz	Fastqsanger.gz
	SRR24008061_2.fastq.gz	Fastqsanger.gz
	SRR24008062_1.fastq.gz	Fastqsanger.gz
	SRR24008062_2.fastq.gz	Fastqsanger.gz
	SRR24008063_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 38

Similar Datasets

Project description:Genomic Profiling of Colloid Goitre using Next Generation Sequencing

| PRJNA950571 | ENA

Project description:Genomic Profiling of Hashimoto's Thyroiditis using Next Generation Sequencing

| PRJNA948713 | ENA

Project description:RNA-based Fusion Gene Analysis of Adenomatous Goiter using Next Generation Sequencing

| PRJNA960692 | ENA

Project description:Genomic Profiling of Follicular Nodular Disease using Next Generation Sequencing

| PRJNA950201 | ENA

Genome wide screen to identify HDAC5 association in the cultured striatal neurons

Project description:Purpose: using next generation sequencing, we identify the HDAC5 assocaited genomic region in the mouse cultured striatal neurons.

2017-09-28 | GSE103296 | GEO

Proteome-wide identification of SAPs in an industrial yeast strain

Project description:Most proteogenomic approaches for mapping single amino acid polymorphisms (SAPs) require construction of a sample-specific database containing protein variants predicted from the next-generation sequencing (NGS) data. We present a new strategy for direct SAP detection without relying on NGS data. Among the 348 putative SAP peptides identified in an industrial yeast strain, 85.6% of SAP sites were validated by genomic sequencing.

2018-04-18 | PXD003101 | Pride

H3K27ac ChIP-Seq of pancreatic islets derived from mice fed a long-term high-fat diet (HFD) against chow-fed controls

Project description:We report the application of next-generation sequencing technology for high-throughput profiling of H3K27ac and transcriptome analysis in pancreatic islets derived from C57Bl/6 mice fed a high-fat diet. We find genomic regions showing change in acetylation of histone H3K27 in response to long-term (26 weeks) HFD feeding, which was significantly associated with differential gene expression. Furthermore, increased H3K27ac showed a distinctive genomic distribution surrounding proximal-promoter regions. This study provides a framework for the application of comprehensive chromatin profiling towards characterization of diverse mammalian cells under various environments.

2018-10-02 | E-MTAB-6719 | biostudies-arrayexpress

Molecular Profiling to Improve Outcome of Patients in Cancer. A Pilot Study

Project description:Next Generation Sequencing in cancer: a feasibility study in France to assess sample circuit and to perform analyzes within a limited time.

| 2274538 | ecrin-mdr-crc

DNA O-MAP uncovers the molecular neighborhoods associated with specific genomic loci

Project description:Here, we introduce a method termed DNA O-MAP, which uses programmable peroxidase-conjugated oligonucleotide probes to biotinylate nearby proteins. We show that DNA O-MAP can be coupled with sample multiplexed quantitative proteomics and next-generation sequencing to quantify DNA-protein and DNA-DNA interactions at specific genomic loci.

2024-07-20 | MSV000095396 | MassIVE

mouse_APAP

Project description:Comprehensive cataloging of cell-free circulating RNAs using next generation sequencing technology may open a window to assess drug associated adverse effects at the systems level. To explore this potential, we conducted an RNA profiling study using the well-characterized acetaminophen overdose mouse model on liver and plasma with next generation sequencing platforms.

2013-03-08 | E-MTAB-1538 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data