Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: WGS data of Termite-associated fungus Aspergillus chevalieri BYST01

PROVIDER: PRJNA955096 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24152525_1.fastq.gz	Fastqsanger.gz
	SRR24152525_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:Hi-C data of Termite-associated fungus Aspergillus chevalieri BYST01

| PRJNA955110 | ENA

Aspergillus chevalieri

Project description:Aspergillus chevalieri overview

| PRJNA464082 | ENA

Project description:Ophiostomatalean fungi associated with fungus farming termite combs

| PRJNA713969 | ENA

Aspergillus chevalieri

Project description:Genome analysis of Aspergillus chevalieri

| PRJDB10979 | ENA

Aspergillus chevalieri

Project description:Aspergillus chevalieri Raw sequence reads

| PRJNA1211313 | ENA

Aspergillus chevalieri

Project description:Aspergillus chevalieri Raw sequence reads

| PRJNA556526 | ENA

Aspergillus chevalieri strain:CBS 522.65 | isolate:CBS 522.65

Project description:Aspergillus chevalieri CBS 522.65 Transcriptome

| PRJNA459597 | ENA

Lower respiratory tract single cell and neutrophil extracellular trap profiling of COVID-19-associated pulmonary aspergillosis

Project description:COVID-19-associated pulmonary aspergillosis (CAPA) is a frequent, severe superinfection with the fungus Aspergillus affecting critically ill COVID-19 patients. The pathophysiology of this infection is still largely unknown. We performed an explorative study by performing single-cell RNA sequencing (scRNA-seq) on 43 bronchoalveolar lavage (BAL) fluid samples from 39 mechanically ventilated COVID-19 patients.

| EGAS00001007556 | EGA

termite gut metagenome

Project description:Fungus-growing termite microbiome

| PRJNA219731 | ENA

Influence of International Space Station Conditions on Fungal ‘Omics’ in Aspergillus nidulans

Project description:This study presents the first global genomic, proteomic, and secondary metabolomic characterization of the filamentous fungus, Aspergillus nidulans, following growth on the International Space Station (ISS). The investigation included the A. nidulans wild-type and 3 mutant strains, two of which were genetically engineered to enhance secondary metabolite (SM) production. Whole genome sequencing (WGS) revealed that ISS conditions altered the A. nidulans genome in specific regions. In strain CW12001, which features overexpression of the SM global regulator laeA, ISS conditions induced a point mutation that resulted in the loss of the laeA stop codon. Differential expression of proteins involved in stress response, carbohydrate metabolic processes, and SM biosynthesis was observed. ISS conditions significantly decreased prenyl xanthone production in the wild-type strain and increased asperthecin production in LO1362 and CW12001, which are deficient in a major DNA repair mechanism. Together, these data provide valuable insights into the genetic and molecular adaptation mechanism of A. nidulans to the spacecraft environment and present many economic benefits.

2022-05-19 | PXD010778 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data