Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Sequencing of Strawberry under Drought Stress

PROVIDER: PRJNA977468 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24794405_1.fastq.gz	Fastqsanger.gz
	SRR24794405_2.fastq.gz	Fastqsanger.gz
	SRR24794406_1.fastq.gz	Fastqsanger.gz
	SRR24794406_2.fastq.gz	Fastqsanger.gz
	SRR24794407_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

E-GEOD-40061

Project description:Role of CAMTA1 gene under drought stress

2015-06-01 | E-GEOD-40061 | ExpressionAtlas

Project description:RNA-Seq of strawberry leaves under drought stress

| PRJNA733854 | ENA

E-ENAD-3

Project description:RNA-seq of Prunus persica roots and leaves under drought stress

2017-12-05 | E-ENAD-3 | ExpressionAtlas

E-GEOD-77826

Project description:Transcription profiling by high throughput sequencing of four potato reference cultivars with differential drought tolerance in response to drought stress

2017-02-20 | E-GEOD-77826 | ExpressionAtlas

E-GEOD-43560

Project description:Allele-specific expression in A. thaliana hybrids grown under control and drought stress conditions

2019-05-14 | E-GEOD-43560 | ExpressionAtlas

E-MEXP-2435

Project description:Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress

2015-10-22 | E-MEXP-2435 | ExpressionAtlas

Molecular dissection of drought tolerance mechanisms in rice by comparative deep transcriptome sequencing

2014-12-30 | GSE57950 | GEO

Molecular dissection of drought tolerance mechanisms in rice by comparative deep transcriptome sequencing

Project description:To dissect the molecular mechanisms underlying drought tolerance (DT) in rice, transcriptome differences of a DT introgression line H471, the DT donor P28 and the drought sensitive recurrent parent HHZ under drought stress were investigated using deep transcriptome sequencing. Results revealed a differential constitutive gene expression prior to stress and distinct global transcriptome reprogramming among three genotypes under time-series drought stress, consistent with their differential genotypes and DT phenotypes. DT introgression line H471, the DT donor P28 and the drought sensitive recurrent parent HHZ under drought stress were investigated using deep transcriptome sequencing.The drought stress treatment was started by withholding water at the tillering stage. The days were counted after the AWC in the soil reached 20% to allow drought measurements at precisely determined intervals, and the soil water content reached 15%, 10% and 7.5% after 1d, 3d and 4d drought treatment, respectively.Three top leaves for each sample were harvested for each genotype under 1d and 3d drought stress and control conditions. All samples were immediately frozen in liquid nitrogen and stored at -80C and then for transcriptome sequencing.

2014-12-30 | E-GEOD-57950 | biostudies-arrayexpress

Polysome bound mRNA Seq analysis of tolerant (APO) and susceptible (IR64) variety of Oryza sativa cv. Indica under 50% drought

Project description:Plants evolved several acquired tolerance traits for drought stress adaptation to maintain the cellular homeostasis. The combination of constitutive and acquired traits governs drought tolerance, which is crucial for maintaining crop productivity under drought. Drought affects protein synthesis, to uncover the translational landscape with response to drought stress in rice, polysome bound mRNA sequencing at anthesis stage in resistant APO and sensitive IR64 genotypes were performed. Our results demonstrate that drought tolerant genotype maintains higher transcripts bound to poly-ribosomes which facilitate higher protien synthesis which impacted on photosynthesis, spikelet fertility, seed filing and yield under drought stress. We identified many novel LncRNAs and relevant genes associated with translation which can play important role in manitaing grain protein content with drought tolerance.

2024-03-20 | GSE232522 | GEO

Identification and analysis of microRNAs associated with drought tolerance in cowpea

Project description:To identify novel microRNAs that are associated with drought tolerance in two different cowpea genotypes, we generated small RNA sequences from adult cowpea plants under control and dought stress treatments. Over 79 million raw reads were generated and numerous novel microRNAs are identified, including some associated with drought tolerance. Sequencing of small RNAs in two cowpea genotypes under control and drought stress conditions.

2011-09-01 | E-GEOD-26402 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data