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Next Generation Sequencing of Two H3K36 methyltransferases during growth mycelia in the Magnaporthe oryzae

ABSTRACT: Next Generation Sequencing of Two H3K36 methyltransferases during growth mycelia in the Magnaporthe oryzae

PROVIDER: PRJNA985625 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR24975866_1.fastq.gz	Fastqsanger.gz
	SRR24975866_2.fastq.gz	Fastqsanger.gz
	SRR24975867_1.fastq.gz	Fastqsanger.gz
	SRR24975867_2.fastq.gz	Fastqsanger.gz
	SRR24975868_1.fastq.gz	Fastqsanger.gz

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Genome-wide mapping of Two H3K36 methyltransferases during growth mycelia in the Magnaporthe oryzae

Project description:Genome-wide mapping of Two H3K36 methyltransferases during growth mycelia in the Magnaporthe oryzae

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Phosphoproteome of Magnaporthe oryzae

Project description:Rice blast caused by Magnaporthe oryzae is the most devastating disease of cultivated rice. Several protein kinase cascades have been known to be essential to pathogenesis or important for response to stress, mycelial growth and conidiation in M. oryzae. However, phosphoproteins and their phosphorylation sites (p-sites) in this important fungal pathogen remain largely to be identified. In this study, 8087 phosphopeptides corresponding to 9825 p-sites from 1147 phosphoproteins were identified in mycelia of M. oryzae under a false discovery rate of < 0.55% at the peptide level. Notably, 33 previously reported pathogenesis-related proteins were included in the phosphoproteins at the mascot delta score 10. Further analyses of 581 motif-containing phosphoproteins that met more stringent criteria revealed that the phosphoproteins shared 19 distinct phosphorylation motifs, including the motif RxxpSP that was newly identified in this study but is widely distributed in diverse organisms. These phosphoproteins were mapped into 81 biological pathways. A total of 82 acidic motif-containing phosphoproteins were identified. Surprisingly, none of them except one were mapped to any of the metabolic pathways. Furthermore, a prediction disclosed a total of 174 kinase-substrate specific interactions in mycelia of M. oryzae. This study also detected phosphorylation of the tyrosine phosphatase Pmp1 and 7 other proteins upstream of Pmk1, but not Pmk1 and its downstream transcription factors. These results prompted a necessary revision of Pmk1 MAPK cascade, in which dephosphorylation of Pmk1 by Pmp1 in mycelia may block the activation of downstream targets.

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Genome-wide mapping of a repressive H3K36me2 reader during growth mycelia in the Magnaporthe oryzae

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Project description:Repressive H3K36me2 reader during growth mycelia in the Magnaporthe oryzae

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Project description:The rice pathogen, Magnaporthe oryzae, undergoes a complex developmental process leading to formation of an appressorium prior to plant infection. In an effort to better understand phosphoregulation during appressorium development, a mass spectrometry-based study was undertaken. Phosphosites were identified from phosphoproteins from mycelia, conidia, germlings, and appressoria of the wild type and a ckpA mutant. The cyclic-AMP dependent protein kinase A (CPKA) is required for initial perception of the leaf surface, development of functional appressoria, and timely mobilization of storage reserves in conidia, including glycogen and lipid bodies.

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