Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Phytosanitary Survey of Grapevines in Mexico

PROVIDER: PRJNA989637 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25100048_1.fastq.gz	Fastqsanger.gz
	SRR25100048_2.fastq.gz	Fastqsanger.gz
	SRR25100049_1.fastq.gz	Fastqsanger.gz
	SRR25100049_2.fastq.gz	Fastqsanger.gz
	SRR25100050_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 96

Similar Datasets

Gene regulation in wild and cultivated Vitis species during deacclimation and budbreak

Project description:Dormant grapevine buds from 4 genotypes were collected over a variable time series after being exposed to growth room temperatures. Buds were collected from the field during winter and assessed for the loss of cold hardiness (deacclimation) in tandem with analysis of gene expression changes. DEGs are examined for various enriched pathways. Wild grapevines deacclimate faster than cultivated grapevines and the entire gene regulation cascade was also faster in wild grapevines. No keystone genes were identified that could explaint he faster phenotype, suggesting all the regulatory pathways are tuned faster in wild grapes.

2020-01-01 | GSE124820 | GEO

Project description:Genetic Diversity and Origins of Patrimonial Grapevines in Guadalupe Valley, Baja California, Mexico

| PRJNA1237876 | ENA

Pandemic Swine-Origin H1N1 Influenza A Virus Isolates Show Heterogeneous Virulence in Macaques

Project description:This study used virological, histological, immunological and global gene expression to compare the virlence of two newly emerged 2009 H1N1 isolates (A/Mexico/InDRE4487/2009 and A/Mexico/4108/2009) and current seasonal H1N1 influenza strain (A/Kawasaki/UTK-4/2009) in experimentally infected cynomolgus macaques. We showed that infection of macaques with two genetically similar but clinically distinct SOIV isolates from the early stage of the pandemic (A/Mexico/4108/2009 and A/Mexico/InDRE4487/2009) resulted in upper and lower respiratory tract infections and clinical disease ranging from mild to severe pneumonia. Disease associated with these SOIV isolates was clearly advanced over the mild infection caused by A/Kawasaki/UTK-4/2009, a current seasonal strain.

2011-08-30 | GSE31694 | GEO

marine metagenome

Project description:Marine metagenomic survey in northern Gulf of Mexico

| PRJNA420897 | ENA

Delphine's 2nd long-term experiment

Project description:Grapevines are exposed to gradual drought and salinity

2010-08-09 | PRD000224 | Pride

Project description:Survey of microbial eukaryotes from Solidaridad Riviera Maya, Mexico

| PRJEB23922 | ENA

siRNA sequencing of Aedes aegypti from two regions of the Americas reveals insect-specific virus profiles with geographic structure

Project description:We performed small RNA sequencing on recently colonized female Aedes aegypti from Mexico and Brazil. We compare small RNA profiles in midguts and abdomens (without ovaries) either non-bloodfed or 48 hours post non-infectious bloodmeal.

2021-07-01 | GSE154531 | GEO

Comparative proteomics of salt stressed own rooted and 110R grafted Thompson Seedless grapevines

Project description:Salt stress is a rising threat to agriculture system. The accumulation of salts near the plant roots hampers the normal uptake of water causing osmotic stress and ionic toxicity to the plant. Thompson Seedless is a popular table grape variety of Vitis vinifera L., which is sensitive to salt stress when grown on its own roots; grafting it onto a wild rootstock such as 110 Richtor (110R) makes it tolerant to salt stress. In the present study, shotgun-proteomics approach was used for the investigation of salt stress induced molecular response of own rooted and 110R grafted Thompson Seedless grapevines. A salt stress experiment was conducted on sixteen month old potted grapevines. The grapevines were treated with 150mM NaCl solution for seven days and the control vines were irrigated with tap water. The young leaf samples were collected from control and treated vines at three time-points viz. 6 hours, 48 hours and 7 days of salt stress. The stress responsive proteins identified through statistical analysis revealed a distinct response to salinity in both the vines.

2020-01-27 | PXD015515 | Pride

Pandemic Swine-Origin H1N1 Influenza A Virus Isolates Show Heterogeneous Virulence in Macaques

2011-08-29 | E-GEOD-31694 | biostudies-arrayexpress

Host-influenza A virus(infA) interactions

Project description:This SuperSeries is composed of the following subset Series: GSE36461: MiRNA profiling during infection with H1N1 influenza A virus (A/Mexico/InDRE4487/H1N1/2009) GSE36462: MiRNA profiling during infection with H7N7 influenza A virus (A/Ck/Germany/R28/H7N7/2003) GSE36553: mRNA profiling during infection with H1N1 influenza A virus (A/Mexico/InDRE4487/H1N1/2009) Refer to individual Series

2012-04-09 | E-GEOD-36555 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data