Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Infectious pancreatic necrosis virus

ABSTRACT: Infectious pancreatic necrosis virus Genome sequencing and assembly

PROVIDER: PRJNA992373 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25186700_1.fastq.gz	Fastqsanger.gz
	SRR25186700_2.fastq.gz	Fastqsanger.gz
	SRR25186701_1.fastq.gz	Fastqsanger.gz
	SRR25186701_2.fastq.gz	Fastqsanger.gz
	SRR25186687_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

Transcription profiling by array of Atlantic salmon head kidney cells infected with infectious pancreatic necrosis virus

Project description:Infectious pancreatic necrosis (IPN) is a serious viral disease that causes significant economic losses in salmon aquaculture. To characterize the host-pathogen relationship in IPN, we analysed transcriptional profiles of salmon head kidney (SHK-1) cells infected with infectious pancreatic necrosis virus (IPNV) at three timepoints over six days (at 1, 3 & 6 days post infection. The transcriptome was investigated using the TRAITS / SGP 16950-feature Atlantic salmon cDNA microarray, which is enriched for genes with functions related to the immune response.

2011-01-01 | E-TABM-1000 | biostudies-arrayexpress

Infectious Pancreatic Necrosis Virus in Scotland

Project description:Molecular epidemiological study on Infectious Pancreatic Necrosis Virus isolates from aquafarms in Scotland over three decades

| PRJEB28749 | ENA

Gene expression profile after oral vaccination against infectious pancreatic necrosis virus (IPNV)

2012-07-19 | GSE31591 | GEO

Infectious spleen and kidney necrosis virus

Project description:Infectious spleen and kidney necrosis virus Genome sequencing and assembly

| PRJNA528806 | ENA

Infectious spleen and kidney necrosis virus

Project description:Infectious spleen and kidney necrosis virus Genome sequencing and assembly

| PRJNA1190355 | ENA

Infectious hematopoietic necrosis virus

Project description:the changes of lncRNAs induced by infectious hematopoietic necrosis virus

| PRJNA771177 | ENA

Whole-genome bisulfite sequencing of Infectious spleen and kidney necrosis virus

Project description:To obtain the site-by-site methylation landscape of the infectious spleen and kidney necrosis virus (ISKNV) genome, whole-genome bisulfite sequencing (WGBS) was performed on an ISKNV strain from 3 duplicate samples.

2023-08-23 | GSE241500 | GEO

Infectious spleen and kidney necrosis virus

Project description:Infectious spleen and kidney necrosis virus Raw sequence reads

| PRJNA1198315 | ENA

Gene expression profile after oral vaccination against infectious pancreatic necrosis virus (IPNV)

Project description:Oral immunization of trout against infectious pancreatic necrosis virus (IPNV) have been recently reported by using a DNA vector coding the viral capsid VP2 gene encapsulated in alginate microspheres. We report here an study of the transcripts in head kidney and pyloric ceca 7 days after oral vaccination of rainbow trout by using a newly designed rainbow trout 60-mer oligo microarray focused in their immune-related genes. Trout were obtained from 4 different farms, one group of trout was defined as belonging to one of the farms. Each of the trout 4 groups were divided into two subgroups of 6 trout for each subgroup. Subgroup I was orally vaccinated with 10 M-BM-5l of suspension of the vaccine microspheres each containing 10 M-BM-5g of pcDNA-VP2 diluted in 10M-BM-5l of PBS, while subgroup II received similar microspheres suspension but pcDNA. Head kidney and pyloric ceca were collected from each subgroup and RNA was extracted.

2012-07-18 | E-GEOD-31591 | biostudies-arrayexpress

Responses to infectious pancreatic necrosis virus (IPNV) in the liver of Atlantic salmon

Project description:Responses to infectious pancreatic necrosis virus (IPNV) in the liver of Atlantic salmon

| PRJNA723629 | ENA