Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Drosophila Evolution over Space and Time - Version 2

PROVIDER: PRJNA993612 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25232500_1.fastq.gz	Fastqsanger.gz
	SRR25232500_2.fastq.gz	Fastqsanger.gz
	SRR25232600_1.fastq.gz	Fastqsanger.gz
	SRR25232600_2.fastq.gz	Fastqsanger.gz
	SRR25232700_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 456

Similar Datasets

Project description:Drosophila Evolution over Space and Time - Version 2.1 (Additional samples)

| PRJNA1263695 | ENA

Project description:Echinopora lamellosa mycobiome over space and time

| PRJNA1184330 | ENA

Project description:The Oro-Respiratory-Gut Virome Axis Over Space and Time

| PRJNA1336841 | ENA

Project description:Biogeography of thermospores in the North Atlantic over space and time

| PRJNA496528 | ENA

Clonal Evolution of Platinum-Resistant Metastatic Urothelial Cancer

Project description:<p>Using whole-exome sequencing of urothelial carcinoma samples including matched sets of primary and locally recurrent or metastatic UC tumors collected over time and space and an in-depth analysis of tumors from two rapid autopsies, we provide the first detailed analysis of the therapy-driven clonal evolution of platinum-resistant urothelial carcinoma.</p> <p>We performed a systematic and integrated analyses for the molecular characterization of high-grade upper tract urothelial carcinomas (UTUC) using the whole-exome and mRNA sequencing. </p>

| phs001087 | dbGaP

Space-time Mapping Identifies Concerted Multicellular Patterns and Gene Programs in Healing Wounds and their Conservation in Cancers.

Project description:Tissue repair responses in metazoans are highly coordinated by different cell types over space and time. However, comprehensive single-cell based characterization covering this coordination is lacking. Here, we captured transcriptional states of single cells over space and time during skin wound closure, revealing choreographed gene expression profiles. We identified shared and prominent space-time patterns of cellular and gene expression enrichment: which we call multicellular ‘movements’ and which spanned multiple cell types. We validated some of the discovered space-time movements using large volume imaging of cleared wounds and demonstrated the value of this analysis to predict gene products made by macrophages or fibroblasts, which activated gene programs in the opposite cell type. Finally, using two different tumor models, we tested the hypothesis that tumors are like ‘wounds that never heal’ finding conserved wound healing movements in the tumor space, wherein some movements were preferentially used in one tumor versus another.

2022-05-28 | GSE204777 | GEO

Drosophila melanogaster

Project description:Pooled resequencing of Drosophila melanogaster collected through time and space in Europe

| PRJNA388788 | ENA

Oceans Across Space and Time - Orca Basin

Project description:Oceans Across Space and Time

| PRJNA1380460 | ENA

Project description:The Drosophila Genetic Reference Panel, Version 3

| PRJNA1139241 | ENA

Drosophila melanogaster

Project description:Pooled resequencing of Drosophila melanogaster collected through time and space in North America

| PRJNA256231 | ENA