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MetabolomicsSOX2 Drives Esophageal Squamous Carcinoma by Reprogramming Lipid Metabolism and Histone Acetylation Landscape

SOX2 is not only a pioneer transcription factor with critical roles in stem cell function and cell reprogramming but also a potent oncogene for a multitude of squamous cancers. How SOX2 exerts a potent oncogenic activity in squamous lineage is largely unknown. Here we uncovered SOX2 a p...

2025-08-07 | MTBLS7120 | MetaboLights
MetabolomicsAdipocyte-derived β-hydroxybutyrate confers metabolic resilience in multiple myeloma by stabilizing IRF4 via NAT10-mediated acetylation

Multiple myeloma (MM) remains an incurable hematologic malignancy despite advances in treatment. While obesity is a well-established risk factor, the underlying metabolic mechanisms by which adipocytes contribute to disease progression remain elusive. Here, we uncover a critical m...

2026-05-07 | MTBLS14445 | MetaboLights
TranscriptomicsActive chromatin domains are defined by acetylation islands revealed by genome-wide mapping
The identity and developmental potential of a human cell is specified by its epigenome that is largely defined by patterns of chromatin modifications including histone acetylation. Here we report high-resolution genome-wide mapping of diacetylation of histone H3 at Lys 9 and Lys 14 in resting and ac...
ORGANISM(S): Homo sapiens 
2007-02-05 | E-GEOD-6974 | biostudies-arrayexpress
TranscriptomicsGenetic control of yeast chromatin acetylation epi-polymorphisms
Genetic control of yeast chromatin acetylation epi-polymorphisms
ORGANISM(S): Saccharomyces cerevisiae 
2012-09-21 | E-MTAB-575 | biostudies-arrayexpress
GenomicsChIP-seq analysis of H3K9 acetylation enrichment in hESCs and day 8 neural progenitor cells
H3K9 acetylation was enriched in pluripotency genes in hESCs and in neural genes in neural progenitor cells Examination of H3K9 acetylation distributions in hESCs and neural progenitor cells
ORGANISM(S): Homo sapiens 
2015-03-11 | E-GEOD-66778 | biostudies-arrayexpress
GenomicsGenome-wide profiling of H3K56 acetylation and transcription factor binding sites in human adipocytes
We use ChIP-seq to discover the genome-wide sites of acetylation of lysine 56 of the histone H3 (H3K56), which is a target of three histone modifying enzymes with known roles in diabetes and insulin resistance, in human adipocytes derived from mesenchymal stem cells. Surprisingly, we find that a ver...
ORGANISM(S): Homo sapiens 
2011-05-31 | E-GEOD-24326 | biostudies-arrayexpress
ProteomicsIn-vitro acetylation assay of TULP3
Fig. S1D: An in-vitro assay that identified the acetylation sites on recombinant TULP3 with the addition of recombinant human p300.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-10-20 | MSV000086340 | MassIVE
ProteomicsAcetylation site mapping on TULP3
Fig. 2B: Semi-quantitative acetylation level on TULP3 in the presence of either empty pcDNA 3.1(+), Myc-p300, FLAG-PCAF or FLAG-GCN5 following immunoprecipitation.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-10-22 | MSV000086358 | MassIVE
GenomicsHistone acetylation regulates intracellular pH
Differences in global levels of histone acetylation occur in normal and cancer cells, although the reason cells regulate these levels has remained unclear. Here we demonstrate a role for histone acetylation in regulating intracellular pH (pHi). As pHi decreases, histones are globally deacetylated by...
ORGANISM(S): Homo sapiens 
2012-11-04 | E-GEOD-40114 | biostudies-arrayexpress
GenomicsAF9 Links Histone Acetylation to DOT1L-Mediated H3K79 Methylation
The recognition of modified histones by “reader” proteins constitutes a key mechanism regulating gene expression in the chromatin context. Compared with the great variety of readers for histone methylation, few protein modules that recognize histone acetylation are known. Here we show that the evolu...
ORGANISM(S): Homo sapiens 
2014-12-11 | E-GEOD-60366 | biostudies-arrayexpress
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