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MetabolomicsHolo omic investigation of host and microbe in broiler chicken (HoloFood Trial 1/2/3)

Chicken farming is critical for future food security, yet there is still a need for improving animal welfare and optimised feeding strategies. HoloFood will explore the interaction and impact of the microbiome together with the host (animal) in response to different feeding strategies already imp...

2023-06-13 | MTBLS6988 | MetaboLights
GenomicsExamination of whole genome DNA methylation status of two chicken breeds
We report the genome-wide DNA methylation mapping of chicken by methylated DNA immunoprecipitation following by highthroughput sequencing, and the gene expression profile of chicken by RNA-seq. For meDIP-seq, about 17,202,074 to 27,501,760 reads were generated for the tissue and liver tissues of the...
ORGANISM(S): Gallus gallus 
2010-04-02 | E-GEOD-21167 | biostudies-arrayexpress
TranscriptomicsExamination of whole genome gene expression profiles of two chicken breeds
We report the genome-wide DNA methylation mapping of chicken by methylated DNA immunoprecipitation following by highthroughput sequencing, and the gene expression profile of chicken by RNA-seq. For meDIP-seq, about 17,202,074 to 27,501,760 reads were generated for the tissue and liver tissues of the...
ORGANISM(S): Gallus gallus 
2010-04-02 | E-GEOD-21169 | biostudies-arrayexpress
UnknownOnline Chats to Assess Stakeholder Perceptions of Meat Chicken Intensification and Welfare.
Not available
S-EPMC5126769 | biostudies-literature
ProteomicsProteomics investigation reveals breed specific responses to environmental enrichment and broiler meat quality
This study, conducted as part of the mEATquality European Union project, used a large intervention experiment to examine the main effects and interactions of extensification factors in higher-welfare, non-organic systems with relatively low chicken stocking density. The study focused on how chicken ...
ORGANISM(S): Gallus gallus (Chicken) 
2026-05-29 | PXD066390 | Pride
Meat quality Animal welfare Muscle proteome Environmental enrichment Post-mortem muscle biology 
TranscriptomicsInvestigating gene expression differences in two chicken lines with variable propensity to feather pecking
Feather pecking is a major welfare problem in egg production. It may be caused by genetic, physiological and environmental factors. The main aim of this study was to uncover variability in gene expression between individuals from high (HFP) and for low feather pecking (LFP) line using Chicken Gene E...
ORGANISM(S): Gallus gallus 
2012-03-17 | E-GEOD-36559 | biostudies-arrayexpress
TranscriptomicsHatchery stress effects on young chicken
The first period post-hatch with all its stimuli could potentially be stressful for the chicks, and by that affect the welfare of the chicken as they mature. By measuring changes in the transcriptome, along with behavioural phenotypes and hormonal levels, the aim is to investigate short and long ter...
ORGANISM(S): Gallus gallus 
2017-02-28 | E-MTAB-4735 | biostudies-arrayexpress
TranscriptomicsInfection of chicken with avian influenza H5N1 and H5N2 viruses
Transcriptional profiling was carried out on lung and ileum samples at 1dpi and 3dpi from chickens infected with either low pathogenic (H5N2) or highly pathogenic (H5N1) avian influenza. Infected birds were compared to control birds at each time point.
ORGANISM(S): Gallus gallus 
2015-01-19 | E-MTAB-2908 | biostudies-arrayexpress
UnknownParasitic mites alter chicken behaviour and negatively impact animal welfare.
Not available
S-EPMC7237419 | biostudies-literature
UnknownThe 'sustainability gap' of US broiler chicken production: trade-offs between welfare, land use and consumption.
Not available
S-EPMC9156924 | biostudies-literature
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