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TranscriptomicsTranscription profiling of S. cerevisiae phosphomannose isomerase PMI40 deletion strain grown on mannose
YEAST STRAIN:,A genetically modified Saccharomyces cerevisiae yeast strain with PMI40 knockout (MATa URA3 TRP1 LEU2 his3- 1 MAL2-8C SUC2 PMI40::HIS3). The parent strain was CEN.PK113-7A (MATa URA3 TRP1 LEU2 his3- 1 MAL2-8C SUC2) obtained from Euroscarf (9).,CULTIVATION MEDIUM:,The mineral medium use...
ORGANISM(S): Saccharomyces cerevisiae 
2007-07-08 | E-GEOD-1938 | biostudies-arrayexpress
TranscriptomicsStudying the phosphosugar stress in Bacillus subtilis using differential gene expression analysis of wildtype and manA deletion mutant grown on LB mannose medium
Bacillus subtilis has different response systems to cope with external and internal stressors. In this study, we investigated the effect of phosphosugar stress caused by accumulation of phosphosugars in B. subtilis. To do so, manA, the encoding gene of mannose-6-phosphate isomerase, was deleted in B...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 
2019-06-06 | E-MTAB-7262 | biostudies-arrayexpress
TranscriptomicsCsac growth on monosaccharides found in lignocellulose
The co-utilization of hexoses and pentoses derived from lignocellulose is an attractive trait for in microorganisms considered for consolidated biomass processing to biofuels. This issue was examined for the H2-producing, extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus (Csac) g...
ORGANISM(S): Caldicellulosiruptor saccharolyticus 
2010-05-16 | E-GEOD-17425 | biostudies-arrayexpress
TranscriptomicsIdentification of the major PEP-phosphotransferase systems (PTS) for glucose, mannose and cellobiose of L. monocytogenes
Identification of the major PEP-phosphotransferase systems (PTS) for glucose, mannose and cellobiose of Listeria monocytogenes, and their significance for extra- and intracellular growth. Transcriptional profile of prfA, the dependent genes and the PTS genes after growth in MM (minimal medium (Prema...
ORGANISM(S): Listeria monocytogenes EGD-e 
2010-05-19 | E-GEOD-18363 | biostudies-arrayexpress
TranscriptomicsModulation of PrfA activity in Listeria monocytogenes upon growth in different culture media
PrfA activity was studied in L. monocytogenes strain EGD and in an isogenic prfA deletion mutant (EGDΔprfA) carrying multiple copies of the wild-type prfA or the mutant prfA* gene (strains EGDΔprfApPrfA and EGDΔprfApPrfA*) after growth in brain heart infusion (BHI), Luria-Bertani broth (LB) or a def...
ORGANISM(S): Listeria monocytogenes 
2008-11-30 | E-GEOD-12151 | biostudies-arrayexpress
TranscriptomicsA mannose-sensing AraC-type transcriptional activator regulates intestinal colonization of Vibrio cholerae
In this study, we show that ManR (VC1825) activates the transcription of the mannose operon in M9 medium supplemented with fructose or mannose, and when manR is impaired Vibrio cholerae cells fail to colonize the intestine and host survival is significantly prolonged in a fruit fly Drosophila melano...
ORGANISM(S): Vibrio cholerae O1 biovar El Tor str. N16961 
2022-01-05 | GSE192900 | GEO
GenomicsA mannose-sensing AraC-type transcriptional activator regulates intestinal colonization of Vibrio cholerae
A mannose-sensing AraC-type transcriptional activator regulates intestinal colonization of Vibrio cholerae
PRJNA793699 | ENA
ProteomicsMetabolic clogging of mannose in human cancer cells triggers genome instability via dNTP loss
Mannose is an anti-cancer sugar that inhibits cell proliferation and enhances chemotherapy. How mannose exerts its anti-cancer activities, however, remains poorly understood. Here, using genetically engineered human cancer cells that permit the precise control of mannose metabolic flux, we demonstra...
ORGANISM(S): Homo sapiens (Human) 
2023-07-06 | PXD036449 | Pride
Mannose cancer 
GenomicsMannose remodels glucose metabolism to antagonize the overwhelming host inflammatory response
Mannose remodels glucose metabolism to antagonize the overwhelming host inflammatory response
PRJNA1075758 | ENA
TranscriptomicsListeria monocytogenes EGD after growth BHI vs. LB vs. MM
Transcriptional profile of prfA, the dependent genes and the PTS genes after growth in BHI (brain-heart-infusion), LB (Luria Bertani broth) and MM (minimal medium (Premaratne et al. 2001) (each supplemented with 50 mM Glucose). Keywords: media comparison A total of three independently isolated RNA...
ORGANISM(S): Listeria monocytogenes 
2008-11-30 | E-GEOD-12143 | biostudies-arrayexpress
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