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Transcriptomics
(2998)
Proteomics
(2126)
Unknown
(1775)
Genomics
(740)
Metabolomics
(592)
Models
(7)
Other
(3)
Genomic
(1)
Organisms
Arabidopsis thaliana
(539)
Homo sapiens
(382)
Mus musculus
(353)
Saccharomyces cerevisiae
(186)
Drosophila melanogaster
(135)
Rattus norvegicus
(98)
Caenorhabditis elegans
(88)
Schizosaccharomyces pombe
(76)
Triticum aestivum
(46)
Zea mays
(37)
Candida albicans
(37)
Gallus gallus
(35)
Bos taurus
(34)
Danio rerio
(32)
Rattus rattus
(24)
Hordeum vulgare
(24)
Solanum lycopersicum
(23)
Rhizobium leguminosarum
(22)
Sinorhizobium meliloti
(22)
Sus scrofa
(22)
Apis mellifera
(21)
Escherichia coli
(21)
Solanum tuberosum
(20)
Oryza sativa
(19)
Vitis vinifera
(19)
Streptomyces coelicolor
(18)
Glycine max
(17)
Clostridium acetobutylicum
(15)
Ovis aries
(13)
Escherichia coli str. K-12 substr. MG1655
(12)
Organisms
Mus musculus
(57)
Homo sapiens
(43)
Arabidopsis thaliana
(30)
Drosophila melanogaster
(24)
Saccharomyces cerevisiae
(15)
Rattus norvegicus
(12)
soil metagenome
(11)
Canis lupus familiaris
(9)
Oryza sativa
(9)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
(8)
Zea mays
(8)
Danio rerio
(7)
Medicago truncatula
(6)
Sus scrofa
(6)
Bos taurus
(5)
Oncorhynchus mykiss
(4)
Solanum lycopersicum
(4)
Theobroma cacao
(4)
Aspergillus nidulans
(3)
Hordeum vulgare
(3)
Triticum aestivum
(3)
Caenorhabditis elegans
(3)
Macaca mulatta
(3)
Ovis aries
(3)
Gallus gallus
(3)
Atriplex lentiformis
(2)
Methanococcus maripaludis S2
(2)
Phanerodontia chrysosporium
(2)
Populus tremula x Populus alba
(2)
Plasmopara viticola
(2)
Repository
biostudies-arrayexpress
(3122)
pride
(2071)
MetaboLights
(585)
ENA
(556)
geo
(85)
MassIVE
(26)
iProX
(18)
BioModels
(7)
GNPS
(6)
jPOST
(6)
NODE
(3)
EGA
(2)
dbGaP
(1)
MetabolomicsWorkbench
(1)
Tissue
Cell culture
(255)
Leaf
(149)
Plant cell
(143)
Brain
(131)
Whole body
(112)
Liver
(99)
Root
(80)
Heart
(68)
Kidney
(54)
Permanent cell line cell
(49)
Epithelial cell
(43)
Lung
(36)
Blood plasma
(31)
B cell
(30)
Cell suspension culture
(28)
Spleen
(28)
Colon
(27)
Seed
(26)
Skeletal muscle
(26)
Skin
(25)
Shoot
(24)
Embryo
(23)
Testis
(22)
Blood
(21)
Hepatocyte
(20)
Seedling
(17)
T cell
(16)
Mycelium
(15)
Fibroblast
(15)
Urine
(1)
Disease
Normal
(24)
Melanoma
(8)
Neuroblastoma
(5)
Diabetes mellitus
(3)
Mitochondrial complex I deficiency
(2)
Ovarian tumor
(2)
Wilms tumour
(2)
Toxicity
(1)
HPV positive
(1)
Diabetes mellitus type 1
(1)
Intestinal type gastric cancer
(1)
Dermal neurofibroma
(1)
Epithelioid mesothelioma
(1)
Breast Carcinoma
(1)
CUP
(1)
Laryngeal carcinoma
(1)
Not applicable
(1)
Low-stage neuroblastoma
(1)
Colon cancer Dukes C
(1)
Ischaemia reperfusion injury
(1)
Pre-tumoral lesion in a mouse model of human adamantinomatous craniopharyngioma (ACP)
(1)
None
(1)
Blumeria graminis hordei (powdery mildew) inoculation
(1)
Invasive Ductal Carcinoma
(1)
Hypertension
(1)
Hign immune pressure
(1)
Carotid artery disease: ASYMPTOMATIC high-grade inner carotid artery stenosis
(1)
IV
(1)
Kaposi's sarcoma
(1)
Infected
(1)
Technology Type
Mass Spectrometry
(2072)
Shotgun proteomics
(1185)
Mass spectrometry
(393)
Bottom-up proteomics
(346)
Data-dependent acquisition
(236)
Affinity purification coupled with mass spectrometry proteomics
(222)
Mass spectrometry assay
(168)
Data-independent acquisition
(124)
Gel-based experiment
(106)
SWATH MS
(82)
Top-down proteomics
(57)
HDMSE
(39)
NMR spectroscopy
(25)
Chemical cross-linking coupled with mass spectrometry proteomics
(22)
MSE
(20)
All-ion fragmentation
(17)
SRM/MRM
(17)
Affinity proteomics
(9)
DiaPASEF
(8)
Mass spectrometry imaging
(5)
Immunopeptidomics
(4)
NMR spectroscopy assay
(3)
Proteogenomics
(3)
ESI
(1)
Sodium dodecyl sulfate polyacrylamide gel electrophoresis
(1)
Metaproteomics
(1)
RNA mass spectrometry
(1)
Instrument Platform
Illumina NovaSeq 6000
(71)
NextSeq 500
(71)
Illumina HiSeq 2000
(57)
Illumina HiSeq 2500
(42)
Illumina HiSeq 4000
(35)
Axon GenePix 4000A scanning hardware
(19)
Axon- GenePix4000B
(17)
Illumina MiSeq
(15)
Scanning hardware
(11)
NextSeq 2000
(11)
Illumina HiSeq 1500
(11)
NextSeq 550
(11)
ArrayWoRx Biochip Reader [Applied Precision]
(9)
Axon GenePix 4000B scanning hardware
(9)
BGISEQ-500
(9)
GenePix 4000A [Axon Instruments]
(8)
Illumina Genome Analyzer IIx
(7)
GenePix 4000B [Axon Instruments]
(7)
N/A
(7)
Illumina HiSeq 3000
(7)
Agilent Technologies G2565CA microarray scanner
(6)
Illumina Genome Analyzer II
(6)
AB SOLiD 4 System
(5)
Vortex
(5)
DNBSEQ-T7
(5)
ScanArray 4000 [PerkinElmer]
(4)
TruSeq RNA Sample Preparation protocol
(3)
G2565AA DNA microarray scanner [Agilent]
(3)
G2565BA DNA microarray scanner [Agilent]
(3)
ScanArray Express HT [PerkinElmer]
(3)
Publication Date
2025
(478)
2026
(407)
2010
(380)
2024
(360)
2022
(352)
2021
(327)
2023
(325)
2013
(319)
2014
(316)
2011
(302)
2012
(261)
2020
(254)
2015
(253)
2009
(218)
2008
(215)
2016
(195)
2019
(189)
2018
(173)
2017
(155)
2007
(150)
2005
(115)
2006
(99)
2004
(60)
2003
(7)
CHEBI ID
CHEBI:30769
(104)
CHEBI:15428
(102)
CHEBI:15741
(102)
CHEBI:16335
(96)
CHEBI:18012
(92)
CHEBI:16704
(85)
CHEBI:16708
(84)
CHEBI:15891
(82)
CHEBI:17368
(82)
CHEBI:30915
(80)
CHEBI:28044
(79)
CHEBI:17596
(78)
CHEBI:18237
(76)
CHEBI:17568
(75)
CHEBI:28300
(74)
CHEBI:6650
(74)
CHEBI:16750
(73)
CHEBI:17154
(73)
CHEBI:17750
(73)
CHEBI:16027
(73)
CHEBI:16449
(72)
CHEBI:17992
(71)
CHEBI:16919
(70)
CHEBI:15756
(70)
CHEBI:22660
(69)
CHEBI:25017
(69)
CHEBI:32816
(69)
CHEBI:27897
(69)
CHEBI:17295
(69)
CHEBI:17895
(68)
Metabolite Name
Adenine
(98)
Adenosine
(93)
Creatine
(92)
Taurine
(90)
Guanosine
(88)
Hypoxanthine
(88)
Uracil
(85)
Uridine
(84)
L-Tyrosine
(79)
Inosine
(79)
Creatinine
(76)
Betaine
(75)
L-Histidine
(73)
L-Tryptophan
(73)
Choline
(71)
L-Phenylalanine
(71)
Cytosine
(67)
Guanine
(65)
Glycine
(63)
Cytidine
(63)
L-Proline
(62)
Riboflavin
(62)
L-Valine
(62)
Citric acid
(61)
L-Threonine
(59)
L-Glutamine
(59)
Xanthine
(58)
Sucrose
(58)
Succinic acid
(57)
L-Lysine
(56)
First Public Date
2014
(166)
2024
(59)
2025
(54)
2026
(46)
2013
(40)
2020
(32)
2023
(29)
2021
(24)
2017
(24)
2022
(22)
2019
(19)
2015
(16)
2016
(13)
2018
(12)
Modelling Approach
Constraint-based model
(4)
Lab affiliation
EDyP
(10)
School of Life Sciences, University of Warwick
(9)
Key Lab of Integrated Crop Pest Management of Shandong, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China
(8)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany
(8)
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences
(7)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany
(7)
University of Victoria
(6)
Whitehead Institute and MIT
(5)
Department of Cardiovascular Medicine, Center for Circadian Metabolism and Cardiovascular Disease, Southwest Hospital, Army Medical University; Chongqing, China.
(5)
ETH Zürich Institute of Molecular Systems Biology HPM F43 Otto-Stern-Weg 3 8093 Zürich Switzerland
(5)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research
(5)
Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France
(5)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark
(5)
Shenzhen Second People’s Hospital, The First Affiliated Hospital of Shenzhen University, Shenzhen, China
(4)
University of Alabama at Birmingham, O'Neal Mass Spectrometry Proteomics Shared Facility
(4)
Molecular Genetics, RPTU Kaiserslautern
(4)
Faculty of Life Science, University of Manchester, United Kingdom
(4)
University of the Balearic Islands
(4)
Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. Unidade de Biologia Integrativa, Setor de Genômica e Proteômica, UENF, Campos dos Goytacazes, RJ, Brazil.
(4)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland
(4)
Huazhong Agricultural University
(4)
College of Life Sciences, South-Central University for Nationalities
(4)
Bioplatforms Australia
(4)
ETHZ IMSB
(4)
Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences
(4)
Liverpool John Moores University
(4)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic
(4)
Biognosys AG
(4)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
(4)
Gansu Provincial Key Lab of Aridland Crop Science/ Gansu Agricultural University, Lanzhou, China
(3)
Tags
pathogen
(29)
pathogen:bacterium
(20)
pathogen:fungus
(9)
xref:PubMed:21503142
(6)
xref:PubMed:41261861
(5)
xref:PubMed:14762175
(4)
xref:PubMed:25309519
(3)
xref:PubMed:32376953
(3)
xref:PubMed:38637717
(3)
xref:PubMed:35872574
(2)
xref:PubMed:19154620
(2)
xref:PubMed:29491423
(2)
xref:PubMed:37443828
(2)
xref:PubMed:17003243
(2)
xref:PubMed:19625612
(2)
xref:PubMed:24143179
(2)
xref:PubMed:27519859
(2)
xref:PubMed:20400566
(2)
xref:PubMed:19376920
(2)
xref:PubMed:22816769
(2)
xref:PubMed:40365911
(2)
xref:PubMed:19047114
(2)
xref:PubMed:38808504
(2)
xref:PubMed:19596074
(2)
xref:PubMed:38141848
(2)
xref:ArrayExpress:E-MTAB-4632
(1)
xref:PubMed:38040807
(1)
xref:PubMed:38090360
(1)
xref:PubMed:40746864
(1)
xref:PubMed:40693573
(1)
IsPrivate
False
(7)
Model Flag
Non Kinetic
(4)
Classification
bacteria
(20)
fungi
(9)
Modification
4-tetrahydrothiazine-3-carboxylic acid
(6)
57.021464
(3)
15.994915
(2)
2x(15)N labeled L-lysine
(2)
4x(15)N labeled L-arginine
(2)
Not available
(2)
58.005479
(1)
N6
(1)
N6-dimethyl-L-lysine
(1)
+3amu)
(1)
Study type
Transcription profiling by array
(2049)
RNA-seq of coding RNA
(374)
ChIP-seq
(138)
RNA-seq of non coding RNA
(74)
ChIP-chip by array
(70)
ChIP-chip by tiling array
(56)
Unknown experiment type
(40)
Other
(36)
Comparative genomic hybridization by array
(34)
Transcription profiling by tiling array
(19)
Methylation profiling by high throughput sequencing
(17)
RNA-seq of total RNA
(17)
Ribo-seq
(15)
DNA-seq
(15)
Methylation profiling by array
(14)
RNA-seq of coding RNA from single cells
(14)
High-throughput sequencing
(10)
Animal - High-throughput sequencing
(10)
Plant - High-throughput sequencing
(9)
Hi-C
(9)
Cell line - High-throughput sequencing
(7)
MicroRNA profiling by array
(7)
RIP-seq
(6)
Transcription profiling by SAGE
(5)
ATAC-seq
(5)
Human - High-throughput sequencing
(4)
RNAi profiling by array
(4)
MicroRNA profiling by high throughput sequencing
(4)
Single nucleus RNA sequencing
(4)
Animal - One-color microarray
(3)
Release Date
2010
(393)
2013
(363)
2014
(351)
2011
(320)
2012
(291)
2015
(273)
2022
(246)
2021
(244)
2009
(236)
2025
(235)
2008
(226)
2023
(214)
2016
(206)
2020
(199)
2024
(190)
2019
(149)
2007
(146)
2018
(137)
2017
(119)
2005
(119)
2006
(98)
2026
(65)
2004
(55)
2003
(10)
2002
(4)
2001
(3)
2000
(3)
1998
(2)
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Generalizing, Extending, and Maximizing Nitrogen-15 Hyperpolarization Induced by Parahydrogen in Reversible Exchange.
Not available
S-EPMC5378067
|
biostudies-literature
Cite
Microtesla SABRE enables 10% nitrogen-15 nuclear spin polarization.
Not available
S-EPMC4333583
|
biostudies-literature
Cite
Growth of Candida norvegensis (strain Levazoot 15) with different energy, nitrogen, vitamin, and micromineral sources.
Not available
S-EPMC6863258
|
biostudies-literature
Cite
Exploring the nitrogen ingestion of aphids--a new method using electrical penetration graph and (15)N labelling.
Not available
S-EPMC3871520
|
biostudies-literature
Cite
Direct Hyperpolarization of Nitrogen-15 in Aqueous Media with Parahydrogen in Reversible Exchange.
Not available
S-EPMC5578426
|
biostudies-literature
Cite
Retrieving nitrogen isotopic signatures from fresh leaf reflectance spectra: disentangling δ(15)N from biochemical and structural leaf properties.
Not available
S-EPMC4416452
|
biostudies-literature
Cite
(15)N in tree rings as a bio-indicator of changing nitrogen cycling in tropical forests: an evaluation at three sites using two sampling methods.
Not available
S-EPMC4390989
|
biostudies-literature
Cite
Nitrogen cycling in an extreme hyperarid environment inferred from δ(15)N analyses of plants, soils and herbivore diet.
Not available
S-EPMC4783660
|
biostudies-literature
Cite
Root angle in maize influences nitrogen capture and is regulated by calcineurin B-like protein (CBL)-interacting serine/threonine-protein kinase 15 (ZmCIPK15).
Not available
S-EPMC9544310
|
biostudies-literature
Cite
Transcriptome analysis of nitrogen assimilation preferences in <i>Burkholderia</i> sp. M6-3 and <i>Arthrobacter</i> sp. M7-15.
Not available
S-EPMC12010642
|
biostudies-literature
Cite
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