pmi - OmicsDI

Show results for

Unknown (798)
Transcriptomics (243)
Genomics (205)
Proteomics (56)
Metabolomics (14)
Genomic (2)
Methylation profiling (1)
Other (1)

Organisms

Homo sapiens (92)
Mus musculus (82)
Rattus norvegicus (38)
Arabidopsis thaliana (16)
Escherichia coli (6)
Caenorhabditis elegans (4)
Salmo salar (3)
Ambystoma mexicanum (2)
Zea mays (2)
Oryza sativa (2)
Saccharomyces cerevisiae (2)
Drosophila melanogaster (2)
Talaromyces marneffei PM1 (1)
Atta vollenweideri (1)
Rhodopirellula baltica (1)
Gossypium barbadense (1)
Gossypium hirsutum (1)
Schmidtea mediterranea (1)
Daphnia magna (1)
Vitis vinifera (1)
Nicotiana tabacum (1)
Aedes aegypti (1)
Solanum tuberosum (1)
Canis lupus familiaris (1)
Danio rerio (1)
Brassica napus (1)
Macaca nemestrina (1)
Brassica oleracea (1)
Brassica rapa (1)
synthetic construct (1)

Organisms

Homo sapiens (44)
Mus musculus (26)
Rattus norvegicus (6)
Stephanosporaceae sp. PMI 697 (3)
Ilyonectria europaea PMI-82 (2)
Atractiella rhizophila (2)
Arabidopsis thaliana (2)
Bradyrhizobium sp. YR681 (1)
Herbaspirillum sp. YR522 (1)
Pseudomonas sp. GM84 (1)
Pseudomonas sp. GM80 (1)
Pseudomonas sp. GM79 (1)
Pseudomonas sp. GM78 (1)
Pseudomonas sp. GM74 (1)
Pseudomonas sp. GM67 (1)
Pseudomonas sp. GM60 (1)
Pseudomonas sp. GM55 (1)
Pseudomonas sp. GM50 (1)
Pseudomonas sp. GM49 (1)
Pseudomonas sp. GM48 (1)
Pseudomonas sp. GM41(2012) (1)
Pseudomonas sp. GM33 (1)
Pseudomonas sp. GM25 (1)
Pseudomonas sp. GM24 (1)
Pseudomonas sp. GM21 (1)
Pseudomonas sp. GM18 (1)
Pseudomonas sp. GM16 (1)
Pseudomonas sp. GM102 (1)
Pantoea sp. GM01 (1)
Herbaspirillum sp. CF444 (1)

Repository

biostudies-arrayexpress (234)
ENA (187)
pride (46)
geo (28)
MetaboLights (12)
MassIVE (7)
dbGaP (2)
EGA (2)
jPOST (2)
GNPS (1)
GPMDB (1)
MetabolomicsWorkbench (1)
PanoramaPublic (1)

Tissue

Cell culture (14)
Brain (11)
Blood plasma (4)
Bone (3)
Blood serum (3)
Epithelial cell (3)
Milk (2)
Heart (2)
Blood (2)
Bone (1)
Coronary artery (1)
Squamous epithelial cell (1)
Long bone (1)
Astrocyte of the cerebral cortex (1)
Tibia (1)
Neuron of cerebral cortex (1)
Squamous cell of epidermis (1)
Microglial cell (1)
Retina (1)
Blood platelet (1)
Melanocyte (1)
Embryonic stem cell (1)
Muscle (1)
Plant cell (1)
Leukocyte (1)
Macrophage (1)
Photosynthetic cell (1)
Fibroblast (1)
Primary cell (1)
Erythrocyte (1)

Disease

Alzheimer's disease (7)
Normal (5)
Persian gulf syndrome (2)
Not Available (1)
Prostate adenocarcinoma (1)
Melanoma (1)
Atherosclerosis (1)
Parkinson's disease (1)
COVID-19 (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (47)
Shotgun proteomics (25)
Bottom-up proteomics (11)
Data-dependent acquisition (8)
Mass spectrometry (7)
All-ion fragmentation (4)
Mass spectrometry assay (3)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (3)
NMR spectroscopy (2)
Data-independent acquisition (2)
SRM/MRM (2)
ESI (1)
Glycoproteomics (1)
SWATH MS (1)
Gel-based experiment (1)

Instrument Platform

Illumina NovaSeq 6000 (30)
Illumina HiSeq 3000 (5)
ScanArray 6000 [Perkin Elmer] (4)
Illumina HiSeq 2500 (3)
Q Exactive (3)
Flow injection analysis MS - negative (3)
BD ARIA II Cell Sorter (2)
Illumina NovaSeq X (2)
Illumina MiSeq (2)
Orbitrap Eclipse (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
N/C (1)
Affymetrix GeneChip(R) HT Scanner (1)
Scanning hardware (1)
NextSeq 550 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Agilent 6560 IM-QTOF MS (1)
LTQ Orbitrap Velos (1)
Instrument (1)
Q Exactive HF (1)
Q Exactive Plus (1)
Orbitrap Exploris 480 (1)
Q Exactive HF-X (1)
Orbitrap Fusion Lumos (1)
QTRAP 6500 (Applied Biosystems) (1)
QTRAP 5500 (Applied Biosystems) (1)
Flow injection analysis MS - positive (1)

Publication Date

2014 (40)
2021 (32)
2015 (25)
2013 (25)
2012 (18)
2025 (17)
2016 (17)
2026 (16)
2022 (16)
2011 (16)
2005 (16)
2010 (15)
2024 (13)
2008 (11)
2023 (10)
2009 (10)
2020 (9)
2017 (7)
2007 (7)
2018 (4)
2019 (3)
2004 (2)
2006 (2)

CHEBI ID

CHEBI:18186 (5)
CHEBI:16704 (5)
CHEBI:27897 (5)
CHEBI:17368 (5)
CHEBI:30769 (5)
CHEBI:18132 (4)
CHEBI:16856 (4)
CHEBI:18237 (4)
CHEBI:17126 (4)
CHEBI:28300 (4)
CHEBI:25017 (4)
CHEBI:15555 (4)
CHEBI:15551 (4)
CHEBI:17268 (4)
CHEBI:28044 (4)
CHEBI:17310 (4)
CHEBI:27266 (4)
CHEBI:17750 (4)
CHEBI:15891 (4)
CHEBI:32816 (4)
CHEBI:16737 (4)
CHEBI:16919 (4)
CHEBI:15354 (4)
CHEBI:17596 (4)
CHEBI:84346 (3)
CHEBI:28125 (3)
CHEBI:63974 (3)
CHEBI:35704 (3)
CHEBI:15918 (3)
CHEBI:17713 (3)

Metabolite Name

Taurine (6)
Phenylalanine (6)
Glycine (5)
Carnitine (5)
Tyrosine (5)
Serine (5)
Pyruvate (5)
Uridine (5)
Tryptophan (5)
Ascorbate (4)
Benzoate (4)
Histidine (4)
Glutamate (4)
5-Hydroxy-L-tryptophan (4)
Pyridoxine (4)
Lactate (4)
Asparagine (4)
Alanine (4)
Threonine (4)
Succinate (4)
Glutamine (4)
Fumarate (4)
Pyridoxal (4)
Xanthine (4)
2-Quinolinecarboxylic acid (3)
Geranyl formate (3)
Oxoproline (3)
Cis-1,2-Dihydronaphthalene-1,2-diol (3)
Citronellyl formate (3)
5-exo-Hydroxy-1,2-campholide (3)

First Public Date

2013 (50)
2014 (29)
2020 (15)
2026 (14)
2025 (14)
2024 (14)
2021 (14)
2023 (11)
2022 (7)
2015 (5)
2019 (4)
2018 (4)
2016 (4)
2017 (2)

Classification

bacteria (5)
fungi (1)

Study type

Transcription profiling by array (137)
RNA-seq of coding RNA (38)
ChIP-seq (9)
Comparative genomic hybridization by array (8)
ATAC-seq (7)
Unknown experiment type (5)
Genotyping by array (5)
Methylation profiling by array (4)
RNA-seq of coding RNA from single cells (4)
ScATAC-seq (3)
ChIP-chip by tiling array (2)
RNA-seq of non coding RNA (2)
MeDIP-seq (1)
Animal - One-color microarray (1)
MBD-seq (1)
Transcription profiling by RT-PCR (1)
Other (1)
Single nucleus RNA sequencing (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (125)
2025 (119)
2021 (113)
2023 (109)
2024 (91)
2020 (77)
2014 (51)
2019 (43)
2018 (42)
2015 (33)
2016 (32)
2013 (31)
2017 (30)
2012 (26)
2011 (22)
2010 (22)
2026 (16)
2005 (15)
2008 (11)
2009 (10)
2007 (9)
2004 (2)
2001 (2)
2006 (1)

Lab affiliation

Complex Carbohydrate Research Center, Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, USA. (2)
Department of Biochemistry Biophysics and Structural Biology, Department of Biochemistry and Molecular Biophysics, Washington University in St. Louis, St. Louis, Missouri, United States (2)
Center for Blood Research, Life Sciences Centre, University of British Columbia; Vancouver, British Columbia, Canada, V6T 1Z3. (1)
Center for Blood Research, Life Sciences Centre, University of British Columbia; Vancouver, British Columbia, Canada, V6T 1Z3 (1)
Traumatic Brain Injury Research, Roskamp Institute, Sarasota, FL, USA (1)
Roskamp Institute, Neurodegenerative Disease and Proteomics Lab, Sarasota, FL (1)
Department of Chemistry, University of Texas at Austin, Austin (1)
Max Planck Institute for Molecular Plant Physiology, Small Molecule Signaling Department (1)
VisionGift, Research 2201 SE 11th Ave Portland, Oregon 97214 USA (1)
Justus Liebig University - Giessen Institute of Food Chemistry and Food Biotechnology (1)
University at Pittsbrugh Department of Psychiatry (1)
The Forensic Science Unit, Faculty of Health and Life Sciences, Ellison Building, Northumbria University, Newcastle Upon Tyne, UK (1)
Roskamp Institute (1)
RoskampInstitute (1)
Ellison Building, Northumbria University, Newcastle Upon-Tyne, NE1 8ST, UK (1)
Departments of Biochemistry and Neurology Emory University School of Medicine (1)
1Department of Chemistry, University of Texas at Austin, Austin, TX, 78712, USA (1)
Forensic Science Research Group, Faculty of Health and Life Sciences, Applied Sciences, Northumbria University, NE1 8ST, Newcastle Upon Tyne, UK (1)
Professor, University of Iowa Department of Biochemistry and Molecular Biology (1)
Proteomics platform Necker, Université de Paris –Structure Fédérative de Recherche Necker, INSERM US24/CNRS UMS3633, Paris 75015, France. (1)
University of Geogia Complex Carbohydrate Research Center, Haltiwanger Lab, United States (1)
German Federal Institute for Risk Assessment Department Food Chemistry National Reference Laboratory for Animal Protein in Feed (1)
Department of Chemistry and Biochemistry, Santa Clara University, Santa Clara, CA 95053 USA (1)
Associate Professor and Head of Discovery Proteomics Facility (1)
State Key Laboratory of Complex, Severe and Rare Diseases, Clinical Research Institute, Peking Union Medical College Hospital, Chinese Academy of Medical Science & Peking Union Medical College, Beijing, China (1)
Professor, Emory University School of Medicine Departments of Biochemistry and Neurology (1)
Biology,Washington University in St. Louis (1)
1 Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, the Netherlands 2 Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, the Netherlands (1)
Emory University School of Medicine Departments of Biochemistry and Neurology (1)
Department of Medicinal Chemistry, University of Washington, Seattle, WA 98195, USA (1)

Previous page
1 / 133
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 133
Next page

Sort by:

Relevance

Page size

Ilyonectria europaea PMI-82

Ilyonectria europaea PMI-82 transcriptome

PRJNA459549 | ENA

Stephanosporaceae sp. PMI 697

Stephanosporaceae sp. PMI 697 Transcriptome - PMI_697_R

PRJNA1360796 | ENA

Ilyonectria europaea PMI-82

Ilyonectria europaea PMI-82 Genome sequencing

PRJNA196035 | ENA

Stephanosporaceae sp. PMI 697

Stephanosporaceae sp. PMI 697 overview

PRJNA1362734 | ENA

Post-mortem changes in metabolomic profiles of human serum, aqueous humor and vitreous humor

INTRODUCTION: Application of metabolomic methods to forensic studies may expand the limits of the post-mortem interval (PMI) estimation, and improve the accuracy of the estimation. To this end, it is important to determine which tissue is the most suitable for analysis, and which...

2021-02-02 | MTBLS1518 | MetaboLights

Stephanosporaceae sp. PMI 697

Stephanosporaceae sp. PMI 697 Standard Draft

PRJNA364279 | ENA

Atractiella rhizophila strain:PMI 95

Atractiellales rhizophila PMI 95 Transcriptome

PRJNA251041 | ENA

Atractiella rhizophila strain:PMI 95

Atractiellales rhizophila PMI 95 Genome sequencing

PRJNA234661 | ENA

PMI-controlled mannose metabolism and glycosylation determines tissue tolerance and virus fitness

This study explored the regulatory effect of D-mannose on host immunometabolic responses after viral infection. The results showed that D-mannose can compete with glucose for transporters and hexokinase, inhibiting glycolysis, reducing mitochondrial reactive oxygen species and succinate-induced HIF-...

ORGANISM(S): Homo sapiens

2024-02-13 | GSE255332 | GEO

Malaria Test, Treat and Track policy implementation in Angola: a retrospective study to assess the progress achieved after 4 years of programme implementation.

Not available

S-EPMC7372868 | biostudies-literature

Previous page
1 / 133
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 133
Next page

Sort by:

Relevance

Page size

1322 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Classification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets