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MetabolomicsGBM Cell Lines Reproducibility Pilot Study
Not available
ORGANISM(S): Homo sapiens 
ST000301 | MetabolomicsWorkbench
MetabolomicsMeasurement of 2-hydroxyglutarate for reproducibility project
Not available
ORGANISM(S): Homo sapiens 
ST000904 | MetabolomicsWorkbench
TranscriptomicsHigh Reproducibility Using Sodium Hydroxide Stripped Long Oligonucleotide DNA Microarrays
Recently, long oligonucleotide (60-70mer) microarrays for two-color experiments have been developed and are gaining widespread use. In addition, when there is limited availability of mRNA from tissue sources, RNA amplification can and is being used to produce sufficient quantities of cRNA for microa...
ORGANISM(S): Homo sapiens 
2010-06-10 | E-GEOD-1706 | biostudies-arrayexpress
GenomicsReproducibility of variant calls in replicate next generation sequencing experiments
In this study, we examined the reproducibility of nucleotide variant calls in replicate sequencing experiments of the same genomic DNA. We performed targeted sequencing of all known human protein kinase genes (kinome) (~3.3 Mb) using the SOLiD v4 platform. Seventeen breast cancer samples were sequen...
EGAS00001000826 | EGA
ProteomicsOptimization of Experimental Parameters in Data-Independent Mass Spectrometry Significantly Increases Depth and Reproducibility of Results
Comprehensive, reproducible and precise analysis of large sample cohorts is one of the key objectives of quantitative proteomics. Here, we present an implementation of data-independent acquisition using its parallel acquisition nature that surpasses the limitation of serial MS2 acquisition of data-d...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2020-01-30 | MSV000084874 | MassIVE
GenomicsReproducibility study
Study on the reproducibility of marker gene sequencing of bacterial membrane vesicle DNA
PRJEB85803 | ENA
TranscriptomicsEvaluation of technical (array-to-array) reproducibility of L. vannamei microarray
Five aliquots of the same RNA sample were labeled and hybridized in parallel to the L. vannamei microarray, in order to assess the technical reproducibility of the tool Keywords: technical validation A sample of gill total RNA was divided in 5 identical aliquots, and each aliquot was labeled and hyb...
ORGANISM(S): Litopenaeus vannamei 
2010-07-01 | E-GEOD-4954 | biostudies-arrayexpress
GenomicsRigor and Reproducibility of Acoustofluidics of saliva from healthy donors
Rigor and Reproducibility of Acoustofluidics of saliva from healthy donors
PRJNA985732 | ENA
ProteomicsAddressing reproducibility challenges in cell culture: the impact of oxylipins contained in fetal calf serum
Reproducibility issues regarding complex in vitro cell culture experiments have been mainly attributed to genetic variations within cell lines. Batch-dependent fetal calf serum variations are well known and also represent relevant influencing factors. However, the molecular constituents mediating su...
ORGANISM(S): Homo sapiens (Human) 
2021-06-01 | PXD020617 | Pride
Eicosanoids Macrophages Reproducibility issues Cell metabolism 
GenomicsMulticenter study to assess the reproducibility of NGS-based bacterial typing
Multicenter study to assess the reproducibility of NGS-based bacterial typing
PRJEB15231 | ENA
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