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MetabolomicsUnraveling the metabolic response of Brassica oleracea exposed to Xanthomonas campestris pv. campestris

BACKGROUND: Brassica crops together with cereals represent the basis of world supplies. Due to their importance, the production losses caused by Xanthomonas campestris pv. campestris (Xcc) infection represent a high economic impact. Understanding molecular and biochemical mechani...

2021-10-06 | MTBLS460 | MetaboLights
TranscriptomicsTranscriptomics of Xanthomonas campestris pv campestris in cabbage xylem sap
Xylem sap of young cabbage plantlets was recovered from root pressure exudation and used as a growth medium for the vascular pathogen Xanthomonas campestris pv campestris, the causative agent of the black rot of Brassicaceae.
ORGANISM(S): Xanthomonas campestris pv campestris 
2014-01-04 | E-MTAB-2290 | biostudies-arrayexpress
TranscriptomicsEarly transcriptional response to phytopathogen Xanthomonas campestris pv. campestris by susceptible cabbage host
Black rot, caused by Xanthomonas campestris pv. campestris (Xcc) is one of the most devastating diseases of cruciferous crops worldwide. The pathogen infects and multiplies in plant vascular tissues and, as the disease progresses, the veins of infected tissues turn black and characteristic V-shaped ...
ORGANISM(S): Brassica oleracea var. capitata 
2015-05-09 | E-GEOD-68670 | biostudies-arrayexpress
TranscriptomicsXanthomonas campestris pv. Campestris 8004 far-red light irradiation and XccBphP overexpression transcriptional analysis
RNA isolation and RNA-Seq: Wild-type Xcc or pXccBphP strains were cultured in far-red light or dark conditions up to logarithmic phase (0.7 to 0.8 OD600) at 28C in PYM broth. Total bacterial RNA was isolated using the MasterPureTM RNA Purification Kit (Epicentre, Illumina). Samples corresponding to ...
ORGANISM(S): Xanthomonas campestris pv. campestris 
2016-12-03 | E-MTAB-4958 | biostudies-arrayexpress
ProteomicsComprehensive proteome profiling of a Xanthomonas campestris pv campestris B100 culture grown in a minimal medium with a specific focus on nutrient consumption and xanthan biosynthesis
Xanthan is the most used polysaccharide of bacterial origin. There are many industrial applications for xanthan, especially in food products. The organism Xanthomonas campestris is commonly used for xanthan fermentation, but little is known about the xanthan synthesis mechanism on the proteome level...
ORGANISM(S): Xanthomonas campestris pv. campestris str. B100 
2024-05-24 | PXD041470 | Pride
Quantitative proteomics Xanthan fermentation Time course Xanthomonas campestris pv. campestris b100 Bacterial proteome Lc-ms/ms 
TranscriptomicsXanthomonas campestris pv. campestris 8004: wild type vs. ravA (or ravS or ravR) mutant
Transcriptional profiling of Xanthomonas campestris pv. campestris 8004 comparing control wild type strain with ravA (or ravS or ravR) mutant The effects of mutating ravS, ravR and ravA on EPS synthesis, biofilm production and motility were very different , the factors responsible for these differe...
ORGANISM(S): Xanthomonas campestris pv. campestris 
2012-10-10 | E-GEOD-32908 | biostudies-arrayexpress
GenomicsXanthomonas campestris pv. campestris
Xanthomonas campestris pv. campestris Targeted Locus (Loci)
PRJNA686493 | ENA
GenomicsXanthomonas campestris pv. campestris
Xanthomonas campestris pv. campestris Genome sequencing and assembly
PRJNA837758 | ENA
TranscriptomicsComparative microarrays of Xanthomonas campestris pv. camp. B100 Δcrt1 with the Xanthomonas camp. pv camp B100
To investigate the effect of the transcriptional regulator Crt1 on the transcirptome of Xanthomonas campestris pv. camp (Xcc), comparative genome-wide transcriptome analysis was conducted. For this purpose, the wild-type strain Xcc B100 and the mutant strain Xcc Δcrt1 were each cultivated in triplic...
ORGANISM(S): Xanthomonas campestris pv. campestris 
2022-10-25 | E-MTAB-12383 | biostudies-arrayexpress
GenomicsXanthomonas campestris pv. campestris str.CN13
Xanthomonas campestris pv. campestris str.CN13 whole genome sequencing
PRJEB4862 | ENA
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