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Unknown
(10411)
Genomics
(1097)
Proteomics
(1074)
Transcriptomics
(977)
Metabolomics
(299)
Clinical
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Other
(11)
Methylation profiling
(10)
Models
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Genomic
(6)
Organisms
Homo sapiens
(619)
Mus musculus
(395)
Drosophila melanogaster
(114)
Saccharomyces cerevisiae
(56)
Rattus norvegicus
(52)
Arabidopsis thaliana
(35)
Schizosaccharomyces pombe
(19)
Caenorhabditis elegans
(17)
Danio rerio
(16)
Bos taurus
(14)
Thermus thermophilus HB8
(11)
Macaca mulatta
(10)
Oryza sativa
(9)
Drosophila simulans
(8)
Escherichia coli
(8)
Streptomyces venezuelae
(7)
Drosophila yakuba
(6)
Ovis aries
(6)
Gallus gallus
(6)
Drosophila pseudoobscura
(5)
Phytophthora infestans
(5)
Pseudomonas protegens
(4)
Neurospora crassa OR74A
(4)
Porphyromonas gingivalis
(4)
Streptomyces griseus
(3)
Pimephales promelas
(3)
Schistosoma mansoni
(3)
Zea mays
(3)
Saccharomyces cerevisiae S288C
(3)
Oryctolagus cuniculus
(1)
Organisms
Homo sapiens
(117)
Mus musculus
(60)
Rattus norvegicus
(14)
Saccharomyces cerevisiae
(12)
Neocallimastix frontalis
(8)
Bos taurus
(8)
Thermus thermophilus HB8
(5)
Nitratidesulfovibrio vulgaris str. Hildenborough
(5)
Panicum virgatum
(5)
Arabidopsis thaliana
(5)
Piromyces communis
(4)
Symbiodinium sp. 240-249
(4)
Gallus gallus
(4)
Sus scrofa
(4)
Escherichia coli
(4)
Ovis aries
(4)
Salix purpurea
(3)
Triticum aestivum
(3)
Glycine max
(3)
Oryza sativa
(3)
bioreactor metagenome
(3)
Morchella dunalii
(2)
Firmicutes bacterium CAG:240
(2)
Phytophthora infestans
(2)
Schistosoma mansoni
(2)
salt marsh metagenome
(2)
Callithrix jacchus
(2)
Drosophila melanogaster
(2)
Capra hircus
(2)
Staphylococcus aureus
(2)
Repository
biostudies-arrayexpress
(1341)
pride
(924)
ENA
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geo
(181)
MetaboLights
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MassIVE
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GNPS
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EGA
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iProX
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BioModels
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dbGaP
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MetabolomicsWorkbench
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EVA
(3)
jPOST
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NODE
(1)
PanoramaPublic
(1)
PeptideAtlas
(1)
Tissue
Cell culture
(173)
Epithelial cell
(70)
Brain
(41)
Blood plasma
(38)
Permanent cell line cell
(25)
Plant cell
(25)
Leaf
(22)
Liver
(22)
Blood
(21)
Fibroblast
(21)
Kidney
(21)
Lung
(20)
Heart
(18)
Cell suspension culture
(17)
B cell
(16)
Colon
(15)
Whole body
(14)
Blood cell
(12)
HeLa cell
(12)
Primary cell
(12)
T cell
(12)
Skin
(11)
Embryo
(10)
Macrophage
(10)
Root
(9)
Liver
(2)
Blood
(2)
Synthetic
(1)
Cultured cells
(1)
Breast
(1)
Disease
Normal
(7)
Neuroblastoma
(6)
Osteosarcoma
(6)
Colorectal Neoplasms
(5)
GIP-dependent Cushing's syndrome
(1)
Early-life seizures
(1)
Oropharynx squamous-cell carcinoma in DiseaseLocation oropharynx has DiseaseStaging lymph node negative (N0)
(1)
Not applicable
(1)
Myeloid neoplasm
(1)
Embryonic lethal at day 8.5 to 9.5
(1)
Portal hypertension
(1)
Rheumatoid arthritis
(1)
Invasive lobular carcinoma
(1)
Cervical carcinoma
(1)
Neurological disease
(1)
Chronic lymphocytic leukemia
(1)
Chronic myelogenous leukemia
(1)
Cancer
(1)
Sarcoma
(1)
Carcinoma
(1)
Healthy donor tissue
(1)
Endometrial cancer
(1)
Pancreatic Cancer
(1)
Non-squamous non-small cell lung cancer
(1)
Bowel cancer
(1)
Cancers such as hepatocellular carcinoma, breast cancer, colorectal cancer and related gastrointestinal cancers, urologic cancers including prostate cancer, pancreas cancer, and lung cancer), on which a significant therapeutic efficacy of Huaier has been reported. Special remarks is emphasized on the cancer cases designated to be related to cancer stem cells
(1)
Patients with metastatic ColoRectal Cancer (mCRC)
(1)
Colonic Diseases
(1)
Malignant neoplasm of colon, unspecified
(1)
Metastatic Colorectal Cancer
(1)
Technology Type
Mass Spectrometry
(929)
Shotgun proteomics
(500)
Bottom-up proteomics
(225)
Data-dependent acquisition
(148)
Mass spectrometry
(93)
Mass spectrometry assay
(79)
Affinity purification coupled with mass spectrometry proteomics
(73)
Data-independent acquisition
(53)
Gel-based experiment
(44)
SRM/MRM
(24)
SWATH MS
(23)
Chemical cross-linking coupled with mass spectrometry proteomics
(20)
Top-down proteomics
(20)
MSE
(6)
ESI
(5)
NMR spectroscopy
(4)
Proteogenomics
(4)
All-ion fragmentation
(2)
DiaPASEF
(2)
Glycoproteomics
(2)
HDMSE
(2)
Mass spectrometry imaging
(2)
RNA mass spectrometry
(2)
Illumina HiSeq 2500, ILLUMINA
(1)
Affinity proteomics
(1)
Instrument Platform
Illumina HiSeq 2000
(13)
Illumina NovaSeq 6000
(12)
NextSeq 500
(12)
Illumina HiSeq 4000
(10)
Illumina HiSeq 2500
(8)
Axon GenePix 4000B scanning hardware
(5)
GenePix 4000A [Axon Instruments]
(4)
G2565AA DNA microarray scanner [Agilent]
(4)
Illumina Genome Analyzer II
(4)
Illumina Genome Analyzer IIx
(3)
Illumina Genome Analyzer
(2)
G2565BA DNA microarray scanner [Agilent]
(2)
Illumina NovaSeq X
(2)
NextSeq 2000
(2)
Illumina HiSeq 1000
(2)
Illumina HiSeq 1500
(2)
NextSeq 550
(2)
Fluidic station FS450
(1)
GCS3000 7G
(1)
In-house Perl scripts
(1)
Agilent Microarray Scanner G2505C
(1)
Agilent Hybridisation Oven G2545A
(1)
Maxwell® 16 AS2000
(1)
Microarray scanner system
(1)
15 mL Falcon tubes
(1)
ScriptSeq v2 Complete Gold Kit (Epidemiology)(Epicentre), ScriptSeq Index PCR primers (Set 1) (Epicentre)
(1)
I686
(1)
Axon Instruments GenePix 4000B scanner
(1)
ScriptSeq Complete Gold Kit (epidemiology) (Illumina)
(1)
Not applicable
(1)
Publication Date
2025
(318)
2026
(232)
2013
(199)
2024
(197)
2011
(190)
2012
(188)
2014
(184)
2015
(150)
2023
(147)
2010
(147)
2022
(144)
2021
(125)
2016
(123)
2020
(110)
2017
(77)
2019
(71)
2008
(65)
2009
(55)
2018
(53)
2007
(43)
2006
(26)
2005
(23)
2004
(13)
2002
(1)
2003
(1)
ENSEMBL ID
ENSG00000167720
(1)
ENSG00000167701
(1)
ENSG00000167699
(1)
ENSG00000204394
(1)
ENSG00000167676
(1)
ENSG00000187676
(1)
ENSG00000204386
(1)
ENSG00000204385
(1)
ENSG00000187581
(1)
ENSG00000167658
(1)
ENSG00000187210
(1)
ENSG00000204370
(1)
ENSG00000204310
(1)
ENSG00000187134
(1)
ENSG00000167588
(1)
ENSG00000187091
(1)
ENSG00000204228
(1)
ENSG00000204084
(1)
ENSG00000187048
(1)
ENSG00000167580
(1)
ENSG00000186951
(1)
ENSG00000204007
(1)
ENSG00000203859
(1)
ENSG00000186908
(1)
ENSG00000167508
(1)
ENSG00000186666
(1)
ENSG00000203857
(1)
ENSG00000203837
(1)
ENSG00000186642
(1)
ENSG00000167468
(1)
CHEBI ID
CHEBI:52386
(1)
CHEBI:15436
(1)
CHEBI:27484
(1)
CHEBI:28728
(1)
CHEBI:15627
(1)
CHEBI:16144
(1)
CHEBI:28922
(1)
CHEBI:34939
(1)
CHEBI:27696
(1)
CHEBI:27555
(1)
CHEBI:17507
(1)
CHEBI:15546
(1)
CHEBI:18116
(1)
CHEBI:28099
(1)
CHEBI:27624
(1)
CHEBI:51340
(1)
CHEBI:28747
(1)
CHEBI:25941
(1)
CHEBI:28770
(1)
CHEBI:48294
(1)
CHEBI:43451
(1)
CHEBI:5764
(1)
CHEBI:17606
(1)
CHEBI:5656
(1)
CHEBI:5623
(1)
CHEBI:5386
(1)
CHEBI:36575
(1)
CHEBI:18268
(1)
CHEBI:4157
(1)
CHEBI:16002
(1)
Metabolite Name
Hypoxanthine
(34)
L-Tyrosine
(30)
Uridine
(29)
L-Threonine
(28)
Adenine
(28)
Taurine
(27)
L-Tryptophan
(27)
Adenosine
(25)
Inosine
(25)
Creatine
(24)
Uracil
(23)
L-Histidine
(23)
L-Proline
(23)
L-Glutamine
(23)
L-Serine
(23)
Cytidine
(23)
L-Phenylalanine
(23)
L-Valine
(22)
L-Leucine
(21)
Thymine
(20)
Xanthosine
(20)
Succinic acid
(20)
Cytosine
(20)
Guanosine
(20)
Sucrose
(20)
L-Isoleucine
(20)
Glycine
(19)
Betaine
(19)
Choline
(19)
Creatinine
(19)
First Public Date
2014
(93)
2025
(57)
2024
(50)
2023
(46)
2022
(46)
2026
(45)
2017
(33)
2019
(32)
2013
(29)
2021
(26)
2020
(26)
2018
(20)
2015
(18)
2016
(12)
Modelling Approach
Ordinary differential equation model
(3)
Mathematical model
(1)
Constraint-based model
(1)
Study status
Completed
(10)
Recruiting
(4)
Not yet recruiting
(2)
Ongoing
(1)
Active, not recruiting
(1)
Lab affiliation
General and molecular microbiology, Institute for chemistry and biology of the marine environment (ICBM), Carl von Ossietzky University of Oldenburg, Oldenburg, Germany
(7)
Instituto de Biotecnología, Grupo de Bioquímica y Parasitología Molecular, Departamento de Parasitología, Universidad de Granada, Granada, Spain.
(6)
EDyP
(5)
CNIC
(4)
Cancer Biology Department, Fox Chase Cancer Center, Philadelphia, PA, USA
(4)
Departamento de Microbiología II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain
(4)
University of Washington
(4)
1School of Natural Sciences, Macquarie University, Sydney, NSW, Australia 2Institute for Glyco-core Research (iGCORE), Nagoya University, Aichi, Japan
(3)
1VIB-UGent Center for Medical Biotechnology, VIB, 9052 Ghent, Belgium 2Department of Biomolecular Medicine, Ghent University, 9052 Ghent, Belgium
(3)
DTU Bioengineering
(3)
Department of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA
(3)
Department of Ecogenomics and Systems Biology, University of Vienna, Althanstrasse 14, 1090 Vienna, Austria
(3)
Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences
(3)
Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II
(3)
Department of Molecular and Applied Microbiology Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute Jena, Germany
(3)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada
(3)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada, N1G 2W1
(3)
Fourth Hospital of Hebei Medical University
(3)
Molecular and Cellular Biology, University of Guelph, Canada
(3)
Professor of Molecular Biology. Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee ,Dundee, DD1 5EH, Scotland, UK
(3)
Shandong Provincial Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, China
(3)
Vanderbilt University Proteomics Core
(3)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
(2)
Biomolecular characterization unit, Center for Sustainable Resource Science, RIKEN
(2)
Boehringer Ingelheim Pharma GmbH & Co. KG Drug Discovery Sciences
(2)
Boston College
(2)
CNPEM
(2)
Center for Immunity and Immunotherapies, Seattle Children's Research Institute. Department of Pediatrics, University of Washington. Seattle, WA USA
(2)
Centre for Gene Regulation and Expression, Sir James Black Centre, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH. UK.
(2)
Centro Nacional de Biotecnología (CNB-CSIC)
(2)
Tags
pathogen
(37)
pathogen:bacterium
(19)
pathogen:virus
(7)
pathogen:fungus
(7)
xref:PubMed:28174132
(5)
xref:PubMed:33024045
(4)
xref:PubMed:28323953
(4)
xref:PubMed:40737429
(3)
xref:PubMed:20025722
(3)
xref:PubMed:16707698
(3)
xref:PubMed:21054499
(3)
xref:PubMed:30333805
(3)
xref:PubMed:27886173
(3)
pathogen:helminth
(3)
xref:PubMed:17114358
(2)
xref:PubMed:30982898
(2)
xref:PubMed:37339167
(2)
xref:PubMed:35061542
(2)
xref:PubMed:40519264
(2)
xref:PubMed:34039964
(2)
xref:PubMed:39970230
(2)
xref:PubMed:25492044
(2)
xref:PubMed:30069049
(2)
xref:PubMed:17768236
(2)
xref:PubMed:37225980
(2)
xref:PubMed:42098356
(2)
xref:PubMed:37563227
(2)
xref:PubMed:38848365
(2)
xref:ArrayExpress:E-MTAB-5316
(1)
xref:PubMed:34122372
(1)
Keyword
Sotorasib
(2)
Prevention
(2)
Panitumumab
(2)
Trifluridine/tipiracil
(1)
Kirsten rat sarcoma p.G12C mutation
(1)
Vinehealth digital app
(1)
Trimebutine
(1)
Sedation-free
(1)
Colonic
(1)
Kappa
(1)
Opioid agonist
(1)
Pain management
(1)
Oral
(1)
Hydrogen sulfide
(1)
Peripheral
(1)
Iconographies
(1)
Patient medical knowledge
(1)
Regorafenib
(1)
AMG 510
(1)
Patient-reported outcome
(1)
Electronic
(1)
Health equity
(1)
Electronic survey
(1)
Treatment delay
(1)
Diet
(1)
Colorectal cancer screening
(1)
CRC screening
(1)
Risk communication
(1)
Trifluridine
(1)
Colonoscopy
(1)
IsPrivate
False
(7)
Model Flag
Non Kinetic
(2)
Classification
bacteria
(19)
viruses
(7)
fungi
(7)
helminths
(3)
protozoa
(1)
Modification
4x(15)N labeled L-arginine
(3)
2x(15)N labeled L-lysine
(2)
N6
(2)
4'-dihydroxyphenylalanine
(1)
4-tetrahydrothiazine-3-carboxylic acid
(1)
N6-dimethyl-L-lysine
(1)
Not available
(1)
Study type
Transcription profiling by array
(519)
ChIP-seq
(464)
RNA-seq of coding RNA
(137)
ChIP-chip by array
(37)
Other
(31)
Methylation profiling by high throughput sequencing
(31)
RNA-seq of non coding RNA
(21)
ChIP-chip by tiling array
(14)
Unknown experiment type
(12)
Comparative genomic hybridization by array
(12)
Methylation profiling by array
(11)
High-throughput sequencing
(6)
Cell line - High-throughput sequencing
(5)
Genotyping by array
(5)
Transcription profiling by tiling array
(4)
DNA-seq
(4)
RNA-seq of coding RNA from single cells
(4)
Plant - High-throughput sequencing
(2)
RNAi profiling by array
(2)
Capture-C
(2)
MicroRNA profiling by array
(2)
RNA-seq of total RNA
(2)
Transcription profiling by array, ChIP-chip by array
(1)
MNase-seq
(1)
One-color microarray
(1)
Cell line - One-color microarray
(1)
CLIP-seq
(1)
ATAC-seq
(1)
RIP-seq
(1)
CUT&RUN
(1)
Release Date
2022
(1256)
2023
(1122)
2025
(1079)
2021
(1058)
2024
(927)
2020
(852)
2019
(717)
2018
(593)
2017
(564)
2015
(514)
2016
(487)
2014
(467)
2013
(394)
2012
(327)
2011
(308)
2010
(265)
2026
(164)
2008
(155)
2009
(150)
2007
(102)
2006
(79)
2005
(55)
2004
(38)
2003
(16)
2002
(15)
2000
(15)
2001
(14)
1998
(8)
1999
(6)
1997
(4)
Location
Australia
(7)
Japan
(4)
United States
(4)
United Kingdom
(3)
Spain
(3)
India
(2)
Taiwan
(2)
Mexico
(2)
Greece
(2)
South Korea
(2)
Italy
(2)
Germany
(2)
New Zealand
(1)
Ukraine
(1)
Peru
(1)
Argentina
(1)
Russia
(1)
Canada
(1)
Brazil
(1)
France
(1)
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Brucella abortus strain:240
Brucella abortus strain:240 Genome sequencing and assembly
PRJNA591448
|
ENA
Cite
Metabolite expression in liver after early life exposure to an endocrine disruptor at 240 days postnatal (part-I)
Not available
ORGANISM(S):
Rattus norvegicus
ST001309
|
MetabolomicsWorkbench
Cite
Morchella dunalii strain:PhC 240
Morchella dunalii PhC 240 Transcriptome - Mordu-RNA1
PRJNA1361018
|
ENA
Cite
Lipid expression in serum after early life exposure to an endocrine disruptor and a Western Diet at 240 days postnatal (part-IV)
Not available
ORGANISM(S):
Rattus norvegicus
ST001313
|
MetabolomicsWorkbench
Cite
Bradyrhizobium japonicum strain:USDA 240 | isolate:USDA 240
Bradyrhizobium japonicum USDA 240 genome sequencing
PRJNA1115772
|
ENA
Cite
Firmicutes bacterium CAG:240
Firmicutes bacterium CAG:240 overview
PRJNA207187
|
ENA
Cite
Populus trichocarpa strain:BESC-240
Populus trichocarpa strain:BESC-240 Genome sequencing
PRJNA256829
|
ENA
Cite
Morchella dunalii strain:PhC 240
Morchella dunalii PhC 240 Standard Draft genome sequencing
PRJNA1080748
|
ENA
Cite
Oryza sativa strain:ubi-XA21 FN-240 | cultivar:Kitaake ubi-XA21 FN-240
Oryza sativa strain:ubi-XA21 FN-240 | cultivar:Kitaake ubi-XA21 FN-240 Genome sequencing
PRJNA334393
|
ENA
Cite
pySymSpec
Symbiodinium sp. 240-249
PRJEB76747
|
ENA
Cite
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