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Unknown
(493)
Metabolomics
(217)
Transcriptomics
(96)
Genomics
(58)
Proteomics
(37)
Models
(1)
Organisms
Homo sapiens
(82)
Mus musculus
(27)
Alphavirus
(10)
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(10)
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(10)
Betaherpesvirinae
(10)
Borrelia
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Arabidopsis thaliana
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(3)
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(2)
Triticum aestivum
(2)
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(1)
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cellular organisms
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Organisms
Homo sapiens
(4)
Mus
(2)
Cyanidioschyzon merolae strain 10D
(1)
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Caenorhabditis elegans
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hydrothermal vent metagenome
(1)
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(1)
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(1)
Mus musculus
(1)
Repository
MetabolomicsWorkbench
(201)
biostudies-arrayexpress
(97)
EGA
(32)
ENA
(18)
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pride
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Cultured cells
(43)
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Cancer
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(22)
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(5)
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(4)
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(2)
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(2)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
Eye disease
(1)
Fatty liver disease
(1)
Disease free
(1)
Hypertrophic cardiomyopathy
(1)
Technology Type
Mass Spectrometry
(211)
ESI
(188)
EI
(20)
Mass spectrometry
(9)
Mass spectrometry assay
(7)
Shotgun proteomics
(6)
Illumina HiSeq 2000
(2)
Bottom-up proteomics
(2)
Illumina HiSeq 2500, ILLUMINA
(1)
Illumina Genome Analyzer, Illumina HiSeq 2000, Illumina MiSeq, Affymetrix_U133plus2-
(1)
Illumina HiSeq 2500
(1)
EI/ESI
(1)
API
(1)
APCI
(1)
Chemical cross-linking coupled with mass spectrometry proteomics
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(1)
SRM/MRM
(1)
Instrument Platform
Liquid Chromatography MS - negative - reverse phase
(4)
Illumina HiSeq 4000
(3)
Q Exactive Plus
(3)
Q Exactive
(3)
Liquid Chromatography MS - positive - reverse-phase
(3)
Liquid Chromatography MS - negative - reverse-phase
(3)
Liquid Chromatography MS - positive - reverse phase
(3)
Illumina NovaSeq 6000
(2)
NextSeq 500
(2)
Orbitrap Fusion
(2)
Gas Chromatography MS - positive
(2)
Liquid Chromatography MS - alternating - reverse-phase
(2)
Affymetrix GCS 3000
(1)
GeneChip® Pico Kit (Affymetrix)
(1)
Affymetrix Clariom™ S (400 Format)
(1)
STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1
(1)
Illumina Nextera XT index kits (Set A–D)
(1)
Oligo(dT) primer and SuperScript II reverse transcriptase (ThermoFisher Scientific), TapeStation 4200 or 2100 Bioanalyzer with a DNA High Sensitivity chip (Agilent Biotechnologies)
(1)
Aria III (BD Biosciences)
(1)
Agilent DNA Microarray Scanner G2565CA
(1)
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(1)
Ion Torrent PGM
(1)
DNBSEQ-T7
(1)
NextSeq 550
(1)
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(1)
LTQ
(1)
Orbitrap Eclipse
(1)
TripleTOF 6600
(1)
Gas Chromatography MS - positive - low polarity - GC-MS
(1)
Direct infusion MS - negative
(1)
Publication Date
2013
(25)
2015
(19)
2024
(12)
2026
(12)
2010
(11)
2019
(8)
2016
(8)
2012
(8)
2025
(6)
2014
(6)
2023
(5)
2022
(5)
2021
(5)
2020
(5)
2018
(4)
2011
(4)
2009
(4)
2017
(3)
2008
(3)
2007
(1)
2006
(1)
UNIPROT ID/AC
14331_SOLTU
(4)
14332_SOLTU
(4)
14335_SOLTU
(4)
4113.PGSC0003DMT400009751
(4)
4113.PGSC0003DMT400013958
(4)
4113.PGSC0003DMT400016201
(4)
4113.PGSC0003DMT400022438
(4)
4113.PGSC0003DMT400027379
(4)
4113.PGSC0003DMT400031900
(4)
4113.PGSC0003DMT400035006
(4)
4113.PGSC0003DMT400035007
(4)
4113.PGSC0003DMT400038109
(4)
4113.PGSC0003DMT400040121
(4)
4113.PGSC0003DMT400040182
(4)
4113.PGSC0003DMT400041662
(4)
4113.PGSC0003DMT400043254
(4)
4113.PGSC0003DMT400047686
(4)
4113.PGSC0003DMT400051919
(4)
4113.PGSC0003DMT400052643
(4)
4113.PGSC0003DMT400053553
(4)
4113.PGSC0003DMT400058778
(4)
4113.PGSC0003DMT400059830
(4)
4113.PGSC0003DMT400059832
(4)
4113.PGSC0003DMT400060471
(4)
4113.PGSC0003DMT400060472
(4)
4113.PGSC0003DMT400065027
(4)
4113.PGSC0003DMT400067873
(4)
4113.PGSC0003DMT400070437
(4)
4113.PGSC0003DMT400071314
(4)
4113.PGSC0003DMT400072364
(4)
CHEBI ID
CHEBI:18012
(6)
CHEBI:15428
(5)
CHEBI:16704
(5)
CHEBI:44897
(5)
CHEBI:30915
(5)
CHEBI:48928
(4)
CHEBI:17050
(4)
CHEBI:15676
(4)
CHEBI:78697
(4)
CHEBI:15741
(4)
CHEBI:16335
(4)
CHEBI:16010
(4)
CHEBI:15891
(4)
CHEBI:16108
(4)
CHEBI:15351
(3)
CHEBI:17980
(1)
CHEBI:16136
(1)
CHEBI:16189
(1)
CHEBI:17709
(1)
CHEBI:17561
(1)
CHEBI:15377
(1)
CHEBI:24636
(1)
CHEBI:16288
(1)
CHEBI:18361
(1)
CHEBI:15379
(1)
CHEBI:16236
(1)
CHEBI:15422
(1)
CHEBI:16761
(1)
CHEBI:16908
(1)
CHEBI:15846
(1)
Metabolite Name
Dihydroxyacetone phosphate
(5)
Phosphoenolpyruvate
(4)
Thymidine
(4)
Melezitose
(3)
Uridine
(3)
Thymine
(3)
Allantoin
(3)
Glycine
(3)
Betaine
(3)
Melibiose
(3)
L-Proline
(3)
Succinic acid
(3)
L-Threonine
(3)
Allantoin
(3)
D-Fructose 6-phosphate
(3)
Apigenin
(3)
Deoxyadenosine
(3)
Nicotinamide
(3)
Choline
(3)
Taurine
(3)
Deoxycholic acid
(3)
Adenosine
(3)
Maltotriose
(3)
Maltose
(3)
L-methionine
(3)
Fumarate
(3)
Deoxyguanosine
(3)
Citrate
(3)
Azelaic acid
(3)
Adenine
(3)
First Public Date
2025
(4)
2026
(3)
2024
(2)
2017
(2)
2023
(1)
2020
(1)
2019
(1)
2016
(1)
2015
(1)
2014
(1)
2013
(1)
Modelling Approach
Ordinary differential equation model
(1)
Lab affiliation
(1) German Center for Neurodegenerative Diseases (DZNE), 72076 Tübingen, Germany (2) University of Tübingen, Center for Ophthalmology, Institute for Ophthalmic Research, 72074 Tübingen, Germany
(1)
CSIC-US, IBVF
(1)
Department of Biology, Institute of Microbiology, ETH Zürich, Switzerland
(1)
Faculty of Biology, St. Petersburg State University (SPbSU), 199034, Universitetskaya em., 7/9, St. Petersburg, Russia
(1)
International crops research institute for the semi-arid tropics
(1)
Lab Head, iGOSH (Centre for Inborn Errors of Metabolism) UCL Institute of Child Health at Great Ormond Street Hospital University College London 30 Guilford Street London WC1N 1EH Tel +44(0)207 905 2873 Fax +44(0)207 905 6191
(1)
School of Pharmacy, Sungkyunkwan University, South Korea
(1)
Senior Scientist, Pharmacology Division, CSIR- Central Drug Research Institute (CDRI), Lucknow-226031, Uttar Pradesh, India.
(1)
University of Victoria
(1)
University of Wisconsin-Madison. Biochemistry Dept. Biotechnology Center.
(1)
Tags
xref:PubMed:36948261
(2)
xref:PubMed:41219536
(1)
xref:PubMed:28705662
(1)
xref:PubMed:37874883
(1)
xref:PubMed:24280389
(1)
xref:PubMed:24681948
(1)
xref:PubMed:27631780
(1)
xref:PubMed:39962504
(1)
xref:PubMed:32651957
(1)
pathogen:fungus
(1)
pathogen
(1)
IsPrivate
False
(1)
Classification
fungi
(1)
Study type
Transcription profiling by array
(60)
RNA-seq of coding RNA
(9)
ChIP-seq
(7)
Methylation profiling by array
(3)
RNA-seq of coding RNA from single cells
(3)
MicroRNA profiling by array
(2)
Genotyping by high throughput sequencing
(2)
RNA-seq of non coding RNA
(2)
Transcription profiling by SAGE
(1)
Unknown experiment type
(1)
Animal - One-color microarray
(1)
Human - One-color microarray
(1)
Transcription profiling by tiling array
(1)
RNAi profiling by array
(1)
ChIP-chip by array
(1)
Comparative genomic hybridization by array
(1)
CUT&RUN
(1)
Release Date
2025
(39)
2015
(39)
2019
(38)
2013
(36)
2021
(35)
2014
(35)
2016
(33)
2023
(32)
2022
(32)
2017
(32)
2012
(32)
2010
(26)
2020
(25)
2018
(24)
2024
(22)
2009
(22)
2011
(17)
2008
(13)
2007
(9)
2005
(9)
2026
(8)
2006
(6)
2000
(5)
2004
(4)
2002
(4)
2001
(4)
2003
(3)
1998
(3)
1999
(2)
1993
(1)
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Molecular mechanism for the inhibition of DXO by adenosine 3',5'-bisphosphate.
Not available
S-EPMC6145842
|
biostudies-literature
Cite
Phosphatidylinositol (4, 5)-bisphosphate targets double C2 domain protein B to the plasma membrane.
Not available
S-EPMC5967617
|
biostudies-literature
Cite
Phosphatidylinositol-(4, 5)-bisphosphate regulates calcium gating of small-conductance cation channel TMEM16F.
Not available
S-EPMC5816197
|
biostudies-literature
Cite
Rac homologues and compartmentalized phosphatidylinositol 4, 5-bisphosphate act in a common pathway to regulate polar pollen tube growth.
Not available
S-EPMC2133117
|
biostudies-literature
Cite
Prospecting for unannotated enzymes: discovery of a 3',5'-nucleotide bisphosphate phosphatase within the amidohydrolase superfamily.
Not available
S-EPMC3985815
|
biostudies-literature
Cite
Characterization of exoribonuclease XRN1 as a cancer target and identification of adenosine-3',5'-bisphosphate as a potent enzyme inhibitor.
Not available
S-EPMC11982291
|
biostudies-literature
Cite
A neurotoxic glycerophosphocholine impacts PtdIns-4, 5-bisphosphate and TORC2 signaling by altering ceramide biosynthesis in yeast.
Not available
S-EPMC3900389
|
biostudies-literature
Cite
Functionalized congeners of P2Y1 receptor antagonists: 2-alkynyl (N)-methanocarba 2'-deoxyadenosine 3',5'-bisphosphate analogues and conjugation to a polyamidoamine (PAMAM) dendrimer carrier.
Not available
S-EPMC2912410
|
biostudies-literature
Cite
Reversible association of ribulose-1, 5-bisphosphate carboxylase/oxygenase activase with the thylakoid membrane depends upon the ATP level and pH in rice without heat stress.
Not available
S-EPMC2892142
|
biostudies-literature
Cite
Phylogeny of 16S rRNA, ribulose 1,5-bisphosphate carboxylase/oxygenase, and adenosine 5'-phosphosulfate reductase genes from gamma- and alphaproteobacterial symbionts in gutless marine worms (oligochaeta) from Bermuda and the Bahamas.
Not available
S-EPMC1538757
|
biostudies-literature
Cite
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