Abel B B - OmicsDI

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Unknown (807)
Transcriptomics (30)
Proteomics (29)
Genomics (17)
Metabolomics (4)
Genomic (1)

Organisms

Homo sapiens (38)
Mus musculus (16)
Rattus norvegicus (3)
Miscanthus sacchariflorus (1)
Physcomitrium patens (1)
mixed sample (1)
Arabidopsis thaliana (1)
Canis lupus familiaris (1)
Escherichia coli (1)
Plasmodium falciparum (1)
Vibrio cholerae O1 str. VC91 (1)

Organisms

Camellia oleifera (3)

Repository

biostudies-arrayexpress (32)
pride (24)
EGA (11)
MassIVE (5)
MetaboLights (4)
ENA (4)
dbGaP (1)

Tissue

HeLa cell (4)
Epithelial cell (3)
Brain (2)
Adipose tissue (1)
CCD-18Co cell (1)
Cell culture (1)
Colon (1)
Connective tissue (1)
Heart (1)
Leaf (1)
Lung (1)
Prostate cancer cell line (1)
Root (1)
Skeletal muscle (1)
Stomach (1)
Stromal cell (1)

Disease

Hodgkin lymphoma, mixed cellularity, stage IV (1)
Neuroblastoma (1)
Colon cancer (1)
Fibrosarcoma (1)
Lung small cell carcinoma (1)
Prostate adenocarcinoma (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (24)
Affinity purification coupled with mass spectrometry proteomics (13)
Shotgun proteomics (10)
Mass spectrometry (4)
Data-dependent acquisition (2)
Gel-based experiment (2)
Illumina Genome Analyzer IIx, Illumina Genome Analyzer II, Affymetrix U219 (1)
Illumina HiScanSQ, ILLUMINA (1)
Bottom-up proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

LTQ (3)
Illumina HiSeq 2000 (2)
Liquid Chromatography MS - negative - reverse phase (2)
G2565BA DNA microarray scanner [Agilent] (1)
Scanning hardware (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
LTQ Orbitrap Elite (1)
TSQ Altis (1)
ACQUITY TQD (Waters) (1)
Liquid Chromatography MS - positive - reverse phase (1)
Q-TOF Premier (Waters) (1)

Publication Date

2020 (7)
2018 (7)
2021 (5)
2017 (4)
2015 (4)
2009 (4)
2023 (4)
2014 (3)
2012 (3)
2022 (3)
2024 (3)
2026 (2)
2019 (2)
2013 (2)
2011 (2)
2008 (2)
2007 (2)
2025 (2)
2016 (2)
2010 (1)
2006 (1)

CHEBI ID

CHEBI:13389 (2)
CHEBI:15345 (2)
CHEBI:15351 (2)
CHEBI:15422 (2)
CHEBI:15467 (2)
CHEBI:15531 (2)
CHEBI:15741 (2)
CHEBI:15978 (2)
CHEBI:15996 (2)
CHEBI:16027 (2)
CHEBI:16108 (2)
CHEBI:16335 (2)
CHEBI:16356 (2)
CHEBI:16449 (2)
CHEBI:16474 (2)
CHEBI:16761 (2)
CHEBI:16856 (2)
CHEBI:16908 (2)
CHEBI:17150 (2)
CHEBI:17345 (2)
CHEBI:17489 (2)
CHEBI:17552 (2)
CHEBI:17858 (2)
CHEBI:18009 (2)
CHEBI:18012 (2)
CHEBI:18237 (2)
CHEBI:22660 (2)
CHEBI:25017 (2)
CHEBI:28300 (2)
CHEBI:29016 (2)

Metabolite Name

NAD (3)
NADP (3)
2-phosphoglycolate (2)
ADP (2)
AMP (2)
ATP (2)
Acetoacetyl-CoA (2)
Acetyl-CoA (2)
Adenosine (2)
Alanine (2)
Arginine (2)
Aspartate (2)
Citrate (2)
DHAP (2)
Fumarate (2)
GDP (2)
GMP (2)
GTP (2)
GTP?? (2)
Glutamate (2)
Glutamine (2)
Glutathione, oxidized (2)
Glutathione, reduced (2)
Glycerol 3-phosphate (2)
HMG-CoA (2)
Isocitrate (2)
Lactate (2)
Leucine (2)
Malate (2)
Malonyl-CoA (2)

First Public Date

2026 (3)
2021 (1)

Study type

Transcription profiling by array (22)
RNA-seq of coding RNA (6)
ChIP-seq (2)
Spatial transcriptomics by high-throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2023 (103)
2021 (90)
2024 (88)
2022 (79)
2025 (71)
2019 (58)
2018 (51)
2020 (45)
2015 (40)
2016 (34)
2017 (33)
2014 (24)
2013 (21)
2012 (16)
2011 (15)
2010 (15)
2009 (12)
2026 (10)
2007 (10)
2008 (7)
2006 (7)
2003 (3)
2005 (2)
2002 (2)
2004 (1)
1999 (1)
1998 (1)

Lab affiliation

IGMM, CNRS, Univ Montpellier, Montpellier, France (5)
IGMM, CNRS, Université de Montpellier, Montpellier, France (4)
Boston College (1)
Department of Medical BioSciences, Radboud Institute for Medical Innovation, Radboudumc, Nijmegen, The Netherlands (1)
Director of Women’s Health Research Women’s Service Line Inova Health System (1)
Glial Cell Biology Lab, i3s - Instituto de Investigação e Inovação em Saúde, Porto, Portugal (1)
Gregor Mendel Institute of Molecular Plant Biology GmbH Dr. Bohr-Gasse 3, 1030 Vienna, Austria Phone: +43 1 79044 9850 http://www.gmi.oeaw.ac.at (1)
IPHC, LSMBO, CNRS (1)
Institute for Research and Innovation in Health, University of Porto, Porto, Portugal; Institute of Molecular Pathology and Immunology of the University of Porto, Porto, Portugal; Institute for Biomedical Sciences Abel Salazar of the University of Porto, Porto, Portugal; Faculty of Medicine of the University of Porto, Porto, Portugal. (1)
Institute for Research and Innovation in Health, University of Porto, Porto, Portugal; Institute of Molecular Pathology and Immunology of the University of Porto, Porto, Portugal; Institute for Biomedical Sciences Abel Salazar of the University of Porto, Porto, Portugal; Faculty of Medicine of the University of Porto, Porto, Portugal. (lab head) (1)
Institute of Veterinary Pharmacology and Toxicology, Vetsuisse Faculty, University of Zurich, Winterthurerstr. 260, 8057 Zurich, Switzerland (1)
Instituto de Biomedicina - iBiMED Universidade de Aveiro 3810-193 Aveiro Portugal (1)
Laboratory of Human Genetics of Infectious Diseases, Necker Branch, INSERM U1163, Necker Hospital for Sick Children, Paris, France; University of Paris, Imagine Institute, Paris, France; St. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University, New York, NY, USA; Department of Pediatrics, Necker Hospital for Sick Children, AP-HP, Paris, France; Howard Hughes Medical Institute, New York, NY, USA (1)
Microbial Genomic Laboratory Division of Biological and Environmental Sciences and Engineering, Level 4, 4326-WS10, Building 2, King Abdullah University of Science and Technology (KAUST), (1)
St. Giles Laboratory of Human Genetics of Infectious Diseases, The Rockefeller University, New York, New York, USA. (1)
University of Southern California (1)
Università degli Studi della Campania Luigi Vanvitelli (1)

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Identification of NAD+ synthetase from Streptococcus sobrinus as a B-cell-stimulatory protein.

Not available

S-EPMC305756 | biostudies-literature

ena-DATASET-CGNT-13-01-2017-11:31:00:793-49 - samples

Total stranded TruSeq RNA sequencing by Illumina of six tumor samples from six cases of pediatric Pilocytic astrocytoma. The data is published in the following paper: Tomic TT, Olausson J, Wilzen A, Sabel M, Truve K, Sjogren H, Dosa S, Tisell M, Lannering B, Enlund F, Martinsson T, Aman P, Abel F. A...

EGAD00001003143 | EGA

Three undescribed dihydrostilbene glycosides from leaves of Camellia oleifera Abel. And their anti-inflammatory activity.

Not available

S-EPMC11088326 | biostudies-literature

Changes in tannin and saponin components during co-composting of Camellia oleifera Abel shell and seed cake.

Not available

S-EPMC7094852 | biostudies-literature

FOXD3 is a mutant B-RAF-regulated inhibitor of G(1)-S progression in melanoma cells.

Not available

S-EPMC2848900 | biostudies-literature

Development of bioluminescent Group B streptococcal strains for longitudinal infection studies.

Not available

S-EPMC11489706 | biostudies-literature

Deep RNA sequencing in CLL

Chronic lymphocytic leukemia (CLL) is a B-cell neoplasm with a heterogeneous clinical and biological behavior. We have performed deep RNA sequencing in different subpopulations of B-lymphocytes from healthy individuals and CLL cells from a cohort of 98 patients, and characterized the CLL transcript...

EGAS00001000374 | EGA

Atomic force microscopy measurements reveal multiple bonds between Helicobacter pylori blood group antigen binding adhesin and Lewis b ligand.

Not available

S-EPMC4223928 | biostudies-literature

Serum levels of B-cell activating factor are associated with a reduced risk of chronic lymphocytic leukemia.

Not available

S-EPMC11306784 | biostudies-literature

A mouse model reproducing the pathophysiology of neonatal group B streptococcal infection.

Not available

S-EPMC6081475 | biostudies-literature