Acetic acid bacteria

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Caenorhabditis elegans (3)
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Organisms

endophyte metagenome (6)
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Escherichia coli str. K-12 substr. MG1655 (2)
Pantoea ananatis (2)
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Komagataeibacter europaeus LMG 18890 (2)
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fermentation metagenome (2)
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Disease

Disease free (3)
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2h after infection with wildtype Streptococcus pyogenes (1)
IRAK-4 Q293X mutation (1)
S enteritidis (1)
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Technology Type

Mass Spectrometry (193)
Shotgun proteomics (114)
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Instrument Platform

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Publication Date

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2008 (27)
2013 (26)
2012 (26)
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2011 (23)
2015 (21)
2016 (19)
2017 (17)
2009 (17)
2018 (14)
2007 (8)
2006 (3)
2005 (1)

UNIPROT ID/AC

P44461 (1)
P44460 (1)
P44462 (1)
P44458 (1)
P44459 (1)
Q57306 (1)
P44656 (1)
P44658 (1)
P44526 (1)
P44692 (1)
P44691 (1)
P44137 (1)
P44136 (1)
P44401 (1)
P44398 (1)
P45046 (1)
P45045 (1)
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P44990 (1)
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P44392 (1)
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P45117 (1)
P43857 (1)
P44722 (1)
P43890 (1)
P43920 (1)
P43948 (1)

CHEBI ID

CHEBI:6328 (1)
CHEBI:21427 (1)
CHEBI:13191 (1)
CHEBI:9733 (1)
CHEBI:27126 (1)
CHEBI:15262 (1)
CHEBI:15263 (1)
CHEBI:58389 (1)
CHEBI:9732 (1)
CHEBI:27125 (1)
CHEBI:15261 (1)
CHEBI:27127 (1)
CHEBI:27392 (1)
CHEBI:71573 (1)
CHEBI:58510 (1)
CHEBI:9807 (1)
CHEBI:22095 (1)
CHEBI:61494 (1)
CHEBI:8171 (1)
CHEBI:45209 (1)
CHEBI:21991 (1)
CHEBI:45080 (1)
CHEBI:45158 (1)
CHEBI:37788 (1)
CHEBI:45187 (1)
CHEBI:61528 (1)
CHEBI:61502 (1)
CHEBI:71316 (1)
CHEBI:58208 (1)
CHEBI:21295 (1)

Metabolite Name

Adenine (21)
Uracil (20)
Hypoxanthine (20)
Inosine (19)
Adenosine (18)
Guanine (18)
Creatinine (18)
Ornithine (17)
Uridine (17)
Creatine (17)
L-Tyrosine (16)
Betaine (15)
Threonine (15)
Xanthine (15)
Guanosine (15)
Choline (14)
Taurine (14)
Thymine (13)
Sphingosine (13)
L-Proline (13)
Citric acid (13)
Oxypurinol (13)
Cytosine (13)
Alanine (13)
Riboflavin (13)
Phenylalanine (13)
L-Tryptophan (13)
L-Glutamine (13)
Uric acid (13)
Tryptophan (13)

First Public Date

2022 (70)
2024 (37)
2025 (33)
2026 (27)
2023 (21)
2020 (14)
2014 (13)
2017 (12)
2019 (11)
2013 (11)
2021 (6)
2011 (6)
2018 (5)
2015 (3)
2016 (1)

Modelling Approach

Constraint-based model (3)

Lab affiliation

Department of Molecular Ecology MPI for Marine Microbiology Celsiusstr. 1 D-28359 Bremen Germany (5)
Experimental Neurology, University Hospital, Frankfurt am Main, Germany (4)
University of Greifswald, Institute of Microbiology, Department of Microbial Proteomics, Greifswald, Germany (4)
Department of Microbial Proteomics, Institute of Microbiology, University of Greifswald, Greifswald, Germany (3)
Functional Genomics, University Medicine Greifswald, Germany (3)
Institut für Mikrobiologie, Universität Greifswald, Felix-Hausdorff-Str. 8, 17489 Greifswald (3)
Institute for Microbiology, University of Greifswald, Felix-Hausdorff-Straße 8, 17489 Greifswald, Germany (3)
Institute of Microbiology, Department of Microbial Proteomics, University of Greifswald, Germany (3)
University of Greifswald, Institute of Microbiology, Department of Microbial Physiology and Molecular Biology (3)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (2)
Chair of Molecular Biology Institute of Cellular and Molecular Biology Estonia (2)
Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA. (2)
Developmental Biology, Institute of Biodynamics and Biocomplexity, Department of Biology, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands (2)
Institut für Mikrobiologie Dept. Mikrobielle Proteomik Universität Greifswald Felix-Hausdorff-Str. 8 17489 Greifswald (2)
Institute of Microbiology, University of Greifswald, Felix-Hausdorff-Strasse 8, 17489 Greifswald, Germany (2)
Interfaculty Institute of Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Germany (2)
Lanzhou University, Lanzhou, Gansu, China (2)
University of Hohenheim, Animal Science, Stuttgart, Germany (2)
1-Department of protein Science, KTH Royal Institute of Technology, Stockholm, Sweden, 2-Science for Life Laboratory, Stockholm, Sweden (1)
Andreas Otto, Institute for Microbiology, Ernst-Moritz-Arndt-University of Greifswald, F.-L. Jahnstrasse 15, 17489 Greifswald, Germany (1)
Animal Sciences Department, Ohio Sate University (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technische Universität München (TUM) Gregor-Mendel-Straße 4 85354 Freising (1)
Biological Mass Spectrometry Lab,Department of Translational Medicine (DiMeT),Center for Translational Research on Autoimmune & Allergic Diseases - CAAD, University of Piemonte Orientale Corso Trieste 15/A, 28100, Novara, Italy (1)
Biological and Life Sciences, Lancaster University (1)
Center of Systems Biology, Biomedical Research Foundation, Academy of Athens, Greece (1)
Centre for Pheromone Technology, Department of Animal Science, Bharathidasan University, Trichirappalli - 620024, TN, India. (1)
Centre for Proteome Research, Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool,L69 7ZB (1)
Centre to Impact AMR, Monash University; Clayton, 3800, Australia Infection Program, Biomedicine Discovery Institute and Department of Microbiology, Monash University; Clayton, 3800, Australia (1)
College of Veterinary Medicine, China Agricultural University, Beijing 100193, China (1)
Danish Cancer Society The Danish Cancer Society Research Center Copenhagen, Denmark (1)

IsPrivate

False (3)

Submitter Keywords

FROG (3)

Classification

bacteria (39)
fungi (1)

Modification

4x(15)N labeled L-arginine (2)
2x(15)N labeled L-lysine (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
Not available (1)

Study type

Transcription profiling by array (169)
RNA-seq of coding RNA (38)
Unknown experiment type (6)
DNA-seq (6)
ChIP-chip by tiling array (4)
Transcription profiling by tiling array (4)
Comparative genomic hybridization by array (4)
High-throughput sequencing (3)
Other (3)
ChIP-chip by array (2)
ChIP-seq (2)
Cell line - High-throughput sequencing (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

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2009 (23)
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2007 (9)
2005 (6)
2006 (5)
2004 (2)
2002 (2)
2001 (2)
2003 (1)
1997 (1)

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acetic acid bacteria

PRJNA288385 | ENA

Acetic acid bacteria

Acetic acid bacteria genome sequencing and assembly

PRJNA1095457 | ENA

Acetic Acid Bacteria and Cellulose

PRJEB28689 | ENA

Miscellaneous Acetic Acid Bacteria

Genome sequencing and assembly of reference strains of acetic acid bacteria

PRJNA638503 | ENA

Extensive PFAS accumulation by human gut bacteria

Per- and polyfluoroalkyl Substances (PFAS) – the so-called ‘forever chemicals’ – are a major cause of environmental and health concern due to their toxicity and long-term persistence. Yet, no efficient mechanisms for their removal have been identified. Here we report the potential of microbial st...

2025-06-30 | MTBLS10622 | MetaboLights

Bioaccumulation and degradation of common pollutants by human gut bacteria

The environmental contamination by manufactured chemicals has by some estimates exceeded the safe planetary boundary. Due to the widespread contamination of water and agricultural systems, a vast number of chemical pollutants make it into the food and hence into the human body. The gut microbiota...

2025-06-30 | MTBLS9745 | MetaboLights

Responses of Staphylococcus aureus exposed to HCl and organic acid stress.

Staphylococcus aureus is an important food poisoning bacterium. In food preservation, acidification is a well-known method. Permeant weak organic acids, like lactic and acetic acids, are known to be more effective against bacteria than inorganic strong acids (e.g., HCl). Growth experiments and metab...

ORGANISM(S): Staphylococcus aureus

2011-04-15 | E-BUGS-87 | biostudies-arrayexpress

Gut Commensal Bacteria-Derived Methionine is Required for Host Reproduction by Modulating RNA m6A Methylation of the Insulin Receptor_targeted metabolites

Gut commensal bacteria promote host reproduction by modulating metabolism and nutrition, but the molecular mechanisms by which microbes regulate reproduction remain unclear. Here, we show that gut commensal bacteria promote host reproduction by providing amino-acid methionine, which controls the ...

2025-06-22 | MTBLS12470 | MetaboLights

Overproduction of indole-3-acetic acid in free-living rhizobia mimics physiological conditions required for nitrogen fixation inside root nodules

Background: The overproduction of the main auxin indole-3-acetic acid (IAA) in Sinorhizobium meliloti RD64 leads to beneficial effects both in free-living rhizobium and in host plant during symbiosis. These effects could be related to alteration in gene expression induced by IAA. Preliminary studies...

ORGANISM(S): Sinorhizobium meliloti

2016-03-30 | E-GEOD-69880 | biostudies-arrayexpress

Narrow-spectrum resource-utilizing bacteria drive the stability of synthetic communities through enhancing metabolic interactions

The importance of synthetic microbial communities in agriculture is increasingly being recognized, but methods for constructing targeted synthetic communities using existing microbial resources remain limited. In this study, six plant beneficial bacterial strains with distinct capacities for utilizi...

2025-07-11 | MTBLS12572 | MetaboLights

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