Activity-profiling

Show results for

Transcriptomics (9076)
Unknown (8321)
Genomics (5662)
Proteomics (966)
Metabolomics (272)
Other (153)
Multiomics (61)
Methylation profiling (59)
Models (4)
Genomic (2)
Clinical (2)

Organisms

Homo sapiens (4832)
Mus musculus (3037)
Arabidopsis thaliana (290)
Rattus norvegicus (262)
Drosophila melanogaster (220)
Saccharomyces cerevisiae (166)
Danio rerio (121)
Caenorhabditis elegans (93)
Sus scrofa (67)
Candida albicans (53)
Escherichia coli (53)
Schizosaccharomyces pombe (50)
Zea mays (43)
Gallus gallus (39)
Oryza sativa (38)
Staphylococcus aureus (35)
Bos taurus (29)
Oryza sativa Japonica Group (25)
Glycine max (22)
Escherichia coli str. K-12 substr. MG1655 (22)
Ovis aries (20)
Escherichia coli K-12 (18)
Pseudomonas aeruginosa (18)
Solanum lycopersicum (17)
Equus caballus (15)
Mycobacterium tuberculosis H37Rv (13)
Chlamydomonas reinhardtii (12)
Plasmodium falciparum K1 (1)
Plasmodium falciparum NF54 (1)
Ostreococcus tauri (1)

Organisms

Homo sapiens (1919)
Mus musculus (1376)
Drosophila melanogaster (89)
Arabidopsis thaliana (78)
Rattus norvegicus (74)
Saccharomyces cerevisiae (49)
Danio rerio (42)
Caenorhabditis elegans (26)
Escherichia coli (19)
Staphylococcus aureus (17)
Candida albicans (16)
Sus scrofa (14)
Gallus gallus (13)
Schizosaccharomyces pombe (11)
Oryza sativa (11)
Penicillium oxalicum (8)
Escherichia coli str. K-12 substr. MG1655 (7)
Bos taurus (7)
Bacillus subtilis subsp. subtilis str. 168 (6)
Glycine max (5)
Pseudomonas aeruginosa (5)
Zea mays (5)
Plasmodium falciparum (5)
human gut metagenome (5)
Pseudomonas aeruginosa UCBPP-PA14 (4)
Mus (4)
Macaca mulatta (4)
Xenopus laevis (4)
Mycobacterium tuberculosis (4)
Aspergillus fumigatus (4)

Repository

biostudies-arrayexpress (7784)
ENA (4582)
geo (2279)
pride (569)
EGA (341)
MetaboLights (243)
MassIVE (147)
iProX (126)
PeptideAtlas (60)
jPOST (30)
MetabolomicsWorkbench (15)
GNPS (14)
PanoramaPublic (8)
PAXDB (5)
ExpressionAtlas (3)
BioModels (2)
dbGaP (2)
Cell Collective (1)
EVA (1)
FAIRDOMHub (1)
GPMDB (1)

Tissue

Cell culture (132)
Epithelial cell (50)
Others (25)
Colon (25)
Brain (22)
Blood (19)
HCT-116 cell (19)
Permanent cell line cell (19)
Lung (17)
Liver (16)
Kidney (13)
Heart (12)
Leaf (12)
B cell (11)
Blood cell (10)
Fibroblast (10)
Cultured cells (9)
Melanocyte (9)
Bacterial cells (6)
Heart (6)
Male Reproductive System (6)
Female Reproductive System (5)
Liver (5)
Kidney (3)
Lung (3)
Breast (2)
Pancreas (2)
Adrenal Gland (1)
Brain (1)
Digestive System (1)

Disease

Normal (21)
Breast cancer (20)
Multiple myeloma (6)
Osteosarcoma (5)
Adenocarcinoma (3)
Glioma (2)
Reference (2)
Prostate cancer (2)
Breast carcinoma (2)
Ovarian cancer (2)
With bone lytic lesion (1)
Fatty liver disease (1)
Primary acute lymphoblastic leukemia (1)
Metastatic colorectal cancer (1)
Early onset preeclampsia (1)
Amyotrophic lateral sclerosis (1)
Congestive heart failure (1)
Early stage liver carcinogenesis (1)
HPV positive (1)
Responder to preoperative radiotherapy (1)
MAS (1)
HIV-1 and Neisseria gonorrhoeae infected (1)
High grade glioblastoma (1)
Extra-adrenal sympathetic paraganglioma (1)
Ewing family tumor (1)
High bone mineral density (1)
4T1 tumor-bearing (1)
Peripheral neuropathy (1)
Primary effusion lymphoma (PEL) (1)
Embryonal Carcinoma (1)

Technology Type

Mass Spectrometry (584)
Shotgun proteomics (275)
Bottom-up proteomics (172)
Mass spectrometry (162)
Data-dependent acquisition (88)
Mass spectrometry assay (71)
Affinity purification coupled with mass spectrometry proteomics (71)
Data-independent acquisition (52)
Gel-based experiment (18)
ESI (15)
Affinity proteomics (12)
SWATH MS (11)
Illumina HiSeq 2000 (10)
NMR spectroscopy (10)
ILLUMINA, Illumina HiSeq 2500 (3)
Illumina HiSeq 4000, ILLUMINA (2)
NMR spectroscopy assay (2)
Illumina MiSeq, Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 4000 (ILLUMINA), Illumina HiSeq 2500 (ILLUMINA), NextSeq 500 (ILLUMINA) (1)
ILLUMINA, Illumina HiSeq 4000, Illumina HiSeq 2500 (1)
ILLUMINA, NextSeq 500 (1)
Illumina HiSeq 2500, ILLUMINA (1)
Ion Torrent Proton, Illumina MiSeq, NextSeq 550 (1)
Illumina HiSeq 3000 (1)
HumanOmni1 Quad BeadChip (1)
Illumina_Infinium_HumanMethylation450, Illumina_HumanHT-12v4 (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HumanCNV370, Illumina HumanHap 300 v2 Duo, Taqman and sequencing, Illumina Human660W-Quad (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000, ILLUMINA (1)

Instrument Platform

Illumina NovaSeq 6000 (469)
Illumina HiSeq 2500 (295)
NextSeq 500 (291)
Illumina HiSeq 2000 (286)
Illumina HiSeq 4000 (210)
NextSeq 550 (69)
Illumina NovaSeq X (63)
NextSeq 2000 (59)
Illumina HiSeq 1500 (35)
Illumina Genome Analyzer IIx (31)
Illumina HiSeq 3000 (29)
Illumina MiSeq (26)
Ion Torrent Proton (23)
DNBSEQ-G400 (23)
Illumina Genome Analyzer II (22)
AB SOLiD 4 System (16)
BGISEQ-500 (14)
HiSeq X Ten (14)
NA (12)
N/A (11)
Illumina HiSeq 1000 (8)
DNBSEQ-T7 (7)
AB 5500xl Genetic Analyzer (7)
None (6)
- (6)
Element AVITI (5)
Novogene in-house automated library preparation system (4)
Compute Cluster (4)
Agilent High resolution C scanner (4)
Not applicable (4)

Publication Date

2015 (1004)
2014 (958)
2013 (875)
2026 (864)
2016 (799)
2025 (789)
2010 (656)
2012 (641)
2011 (578)
2024 (499)
2008 (475)
2023 (455)
2022 (441)
2021 (367)
2020 (341)
2009 (315)
2019 (313)
2018 (256)
2007 (253)
2017 (240)
2006 (57)
2005 (46)
2004 (24)
2002 (4)
2003 (3)

UNIPROT ID/AC

10090.ENSMUSP00000032399 (2)
10090.ENSMUSP00000097919 (2)
1433B_MOUSE (2)
1433E_MOUSE (2)
1433F_MOUSE (2)
1433G_MOUSE (2)
1433S_MOUSE (2)
1433T_MOUSE (2)
1433Z_MOUSE (2)
2A5A_MOUSE (2)
2A5E_MOUSE (2)
2A5G_MOUSE (2)
2AAA_MOUSE (2)
2AAB_MOUSE (2)
2ABA_MOUSE (2)
3BP1_MOUSE (2)
3HIDH_MOUSE (2)
4EBP1_MOUSE (2)
4F2_MOUSE (2)
5NT3B_MOUSE (2)
5NTC_MOUSE (2)
5NTD_MOUSE (2)
6PGD_MOUSE (2)
6PGL_MOUSE (2)
A0A0G2JDV3_MOUSE (2)
A0A0R4J159_MOUSE (2)
A0A140LIF8_MOUSE (2)
A0A1W2P6N8_MOUSE (2)
A0A286YCX6_MOUSE (2)
A0A2I3BQ48_MOUSE (2)

ENSEMBL ID

ENSG00000170477 (58)
ENSG00000229353 (36)
ENSG00000147251 (22)
ENSG00000247315 (17)
ENSG00000204131 (11)
ENSG00000176092 (3)
ENSG00000214897 (3)

CHEBI ID

CHEBI:30769 (47)
CHEBI:16335 (39)
CHEBI:15741 (38)
CHEBI:6650 (37)
CHEBI:15428 (35)
CHEBI:17368 (35)
CHEBI:16704 (32)
CHEBI:18012 (31)
CHEBI:17154 (31)
CHEBI:17596 (31)
CHEBI:25017 (30)
CHEBI:16610 (30)
CHEBI:17568 (30)
CHEBI:16015 (30)
CHEBI:16750 (30)
CHEBI:27897 (30)
CHEBI:15354 (30)
CHEBI:15756 (30)
CHEBI:16811 (29)
CHEBI:15891 (29)
CHEBI:32816 (29)
CHEBI:16235 (29)
CHEBI:30915 (29)
CHEBI:16919 (29)
CHEBI:28044 (28)
CHEBI:16865 (28)
CHEBI:28300 (27)
CHEBI:16708 (27)
CHEBI:30746 (27)
CHEBI:38068 (1)

Metabolite Name

Taurine (48)
Guanosine (48)
Hypoxanthine (48)
Adenosine (47)
Creatine (47)
Choline (43)
Xanthine (43)
Uridine (41)
Inosine (41)
Creatinine (39)
L-Tyrosine (39)
Uracil (38)
L-Histidine (36)
Adenine (36)
Guanine (34)
L-Phenylalanine (34)
Pantothenic acid (33)
Betaine (32)
L-Glutamine (32)
Ornithine (31)
Xanthosine (31)
Thymidine (31)
Citric acid (30)
Uric acid (30)
Cytidine (30)
L-Threonine (29)
Cytosine (29)
Deoxyinosine (29)
Citrulline (27)
Succinic acid (27)

First Public Date

2025 (796)
2026 (755)
2014 (582)
2024 (563)
2023 (442)
2022 (268)
2020 (227)
2019 (204)
2021 (203)
2017 (133)
2018 (130)
2015 (116)
2016 (102)
2013 (59)
2011 (1)
2010 (1)

Modelling Approach

Computational model (1)
Ordinary differential equation model (1)

Study status

Completed (2)

Lab affiliation

University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (19)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (10)
Professor of Molecular Physiology, Leiden Institute of Chemistry, Leiden University, The Netherlands (10)
Moffitt Cancer Center Tampa, FL, USA (5)
Principal Investigator Centre for Targeted Protein Degradation, School of Life Sciences (4)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (3)
Center of Human and Molecular Biology (ZHMB), Saarland University School of Medicine, Homburg, Germany (3)
IRCCS Istituto G Gaslini (3)
Scripps Research (3)
UFIEC, Chronic Disease Programme, Functional Proteomics Unit, Instituto de Salud Carlos III (3)
Aix-Marseille Univ, Inserm, CNRS, Institut Paoli-Calmettes, CRCM, Marseille Protéomique (2)
Boston College (2)
COI-NDM (University of Oxford) (2)
Center for Functional Protein Assemblies (CPA), Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich (TUM), Ernst-Otto-Fischer-Stra?e 8, 85748 Garching, Germany (2)
College of Chemistry and Molecular Engineering, Peking University, Beijing, China. (2)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (2)
Department of Chemistry, Scripps Research (2)
Department of Chemistry, The Scripps Research Institute (2)
Department of Veterinary Biosciences, Melbourne Veterinary School, Faculty of Science, The University of Melbourne, Parkville, Victoria 3010, Australia (2)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway (2)
GSK (2)
Indiana University School of Medicine (2)
Institute of Molecular Biology (IMB), Mainz, Germany (2)
Moffitt Cancer Center (2)
Molecular Genetics, RPTU Kaiserslautern, Germany (2)
Molecular Oncology Chemical Biology and Molecular Medicine Moffitt Cancer Center & Research Institute, SRB3 12902 Magnolia Drive, Tampa, FL, 33612, USA. (2)
Molecular Physiology, Leiden Institute for Chemistry, Leiden University, The Netherlands (2)
Molecular Structure of Cell Signalling Laboratory, The Francis Crick Institute (2)
Pacific Northwest National Laboratory (2)
Pacific Northwest National Laboratory, USA (2)

Keyword

5-Fluorouracile (1)
Strategy study (1)
First line (1)
Folinic Acid (1)
Irinotecan (1)
Metastatic colorectal cancer (1)
Cetuximab (1)

IsPrivate

False (2)

Model Flag

Non Kinetic (1)

Submitter Keywords

Ersilia (1)
FAIR-AIML (1)
Machine Learning Model (1)

Classification

bacteria (99)
fungi (37)
protozoa (10)
viruses (1)

Modification

2x(15)N labeled L-lysine (3)
4x(15)N labeled L-arginine (3)
+3amu) (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
N6 (1)

Study type

Transcription profiling by array (3414)
RNA-seq of coding RNA (2628)
ChIP-seq (320)
RNA-seq of coding RNA from single cells (205)
Other (143)
RNA-seq of non coding RNA (142)
RNA-seq of total RNA (140)
Methylation profiling by array (102)
Unknown experiment type (77)
Methylation profiling by high throughput sequencing (70)
Comparative genomic hybridization by array (63)
Animal - High-throughput sequencing (46)
Cell line - High-throughput sequencing (45)
ChIP-chip by tiling array (27)
Transcription profiling by RT-PCR (27)
RIP-seq (26)
Human - High-throughput sequencing (25)
High-throughput sequencing (23)
Spatial transcriptomics by high-throughput sequencing (19)
Ribo-seq (17)
MicroRNA profiling by high throughput sequencing (16)
Genotyping by array (15)
Single nucleus RNA sequencing (12)
Proteomic profiling by array (12)
ChIP-chip by array (11)
DNA-seq (11)
Transcription profiling by tiling array (10)
ATAC-seq (10)
Transcription profiling by SAGE (9)
RNAi profiling by array (9)

Release Date

2025 (1596)
2015 (1182)
2014 (1095)
2016 (1053)
2022 (1023)
2013 (1010)
2021 (923)
2023 (880)
2024 (803)
2012 (773)
2020 (768)
2010 (721)
2011 (680)
2019 (628)
2026 (583)
2018 (557)
2008 (510)
2017 (495)
2009 (375)
2007 (252)
2006 (77)
2005 (61)
2004 (39)
2003 (9)
2002 (5)
2001 (4)
2000 (1)
1999 (1)

Location

Spain (1)
Italy (1)
France (1)

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Characterization of Constituents with Potential Anti-Inflammatory Activity in Chinese Lonicera Species by UHPLC-HRMS Based Metabolite Profiling

This study centered on detecting potentially anti-inflammatory active constituents in ethanolic extracts of Chinese Lonicera species by taking an UHPLC-HRMS-based metabolite profiling approach. Extracts from eight different Lonicera species were subjected to both UHPLC-HRMS analysis and to pharmacol...

2022-11-17 | MTBLS3112 | MetaboLights

Multi-hierarchical profiling the structure-activity relationships of engineered nanomaterials at nano-bio interfaces

Increasing concerns over the possible risks of nanotechnology necessitates breakthroughs in structure-activity relationship (SAR) analyses of engineered nanomaterials (ENMs) at nano-bio interfaces. However, current nano-SARs are often based on univariate assessments and fail to provide tiered views ...

2020-01-23 | MTBLS721 | MetaboLights

Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv3208

Not available

ORGANISM(S): Mycobacterium tuberculosis H37Rv

ST000937 | MetabolomicsWorkbench

Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv1130

Not available

ORGANISM(S): Mycobacterium tuberculosis H37Rv

ST000234 | MetabolomicsWorkbench

Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv2247

Not available

ORGANISM(S): Mycobacterium tuberculosis H37Rv