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ProteomicsMassively parallel fitness profiling reveals multiple novel enzymes in Pseudomonas putida lysine metabolism
The lysine metabolism of Pseudomonas putida can produce multiple important commodity chemicals and is implicated in rhizosphere colonization. However, despite intensive study, the biochemical and genetic links between lysine metabolism and central metabolism remains unresolved in P. putida. Here, we...
ORGANISM(S): Pseudomonas Putida Kt2440 
PXD011350 | panorama
TranscriptomicsTranscription profiling of primary human keratinocytes
Oncogenic Ras induces epidermal cell growth arrest. Induction of the JNK/Ap1 signaling cascade by expression of MKK7 overcomes Ras-induced cell growth arrest in a manner dependent on AP1 fucntion. We used microarrays to detail the global programme of gene expression in response to MKK7, Ras activat...
ORGANISM(S): Homo sapiens 
2008-06-14 | E-GEOD-6559 | biostudies-arrayexpress
UnknownAllele-Specific HLA Loss and Immune Escape in Lung Cancer Evolution.
Not available
S-EPMC5720478 | biostudies-literature
ProteomicsMetagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens
Instrument data for publication "Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens", ISME J. 2012 Sep; 6(9): 1688-1701. PMID: 22378535. PMCID: PMC3498920
ORGANISM(S): Environmental Samples <verrucomicrobiales> (ncbitaxon:48468) 
2018-05-25 | MSV000082408 | MassIVE
ProteomicsAn automated ‘cells-to-peptides’ sample preparation workflow for high-throughput, quantitative proteomic assays of microbes
Mass spectrometry–based quantitative proteomic analysis has proven valuable for clinical and biotechnology related research and development. Driving this value have been improvements in the sensitivity, resolution, and robustness of mass analyzers. However, manual sample preparation protocols are of...
ORGANISM(S): Escherichia Coli Rhodotorula Toruloides Pseudomonas Putida Kt2440 Saccharomyces Cerevisiae 
PXD014182 | panorama
ProteomicsComprehensive genome-scale and pathway engineering for production of the sustainable aviation fuel in Pseudomonas putida
Biological production of aviation fuels has a realistic impact on global warming. Important sustainable aviation fuel (SAF) targets are emerging and isoprenol is recently identified as a precursor for a promising SAF compound DMCO (1,4-dimethylcyclooctane). Isoprenol has been produced in several eng...
ORGANISM(S): Pseudomonas Putida Kt2440 
PXD039868 | panorama
UnknownTiming of Influenza Antiviral Therapy and Risk of Death in Adults Hospitalized With Influenza-Associated Pneumonia, Influenza Hospitalization Surveillance Network (FluSurv-NET), 2012-2019.
Not available
S-EPMC11847407 | biostudies-literature
GenomicsOCAC OncoArray data
Germline genotype data on 56,479 ovarian cancer cases and controls
EGAD00010001192 | EGA
GenomicsThe Ovarian Cancer Association Consortium OncoArray genome-wide association study
A custom Illumina genotyping array, the OncoArray. The array includes a genome-wide backbone, comprising 230,000 SNPs tagging most common genetic variants, together with dense mapping of known susceptibility regions, rare variants from sequencing experiments, pharmacogenetic markers, and cancer-rela...
EGAS00001002305 | EGA
GenomicsThe Ovarian Cancer Association Consortium Data Access Committee
Data Access Committee EGAC00001000616
EGAC00001000616 | EGA
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