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ProteomicsUsing Adaptive Focused Acoustics (AFA) to Digest the Protein Corona around Nanoparticles in Preparation for LC-MS Analysis
The study evaluates the use of Adaptive Focused Acoustics (AFA) for rapid reduction and enzymatic digestion of nanoparticle-associated protein coronas prior to bottom-up proteomic analysis by LC-MS/MS.
ORGANISM(S): Homo sapiens (Human) 
2026-09-05 | PXD080079 | Pride
Protein corona Sample preparation Adaptive focus acoustics 
TranscriptomicsRNA-seq study of major P.aeruginosa PA14 transcription factors
Gene regulation via transcription factors influences the metabolic, adaptive and pathogenic capabilities of the organism. We report the transcriptomes of the mutants of six major P. aeruginosa PA14 trancription factors - RhlR, LasR, Anr, GacA, FleQ and CbrB. The P. aeruginosa PA14 transposon mutants...
ORGANISM(S): Pseudomonas aeruginosa 
2016-03-01 | E-GEOD-55328 | biostudies-arrayexpress
MetabolomicsTissue metabolites in diffuse glioma and their modulations by IDH1 mutation, histology, and treatment
The discovery of the oncometabolite 2-hydroxyglutarate in isocitrate dehydrogenase 1-mutated (IDH1-mutated) tumor entities affirmed the role of metabolism in cancer. However, large databases with tissue metabolites that are modulated by IDH1 mutation remain an area of development. Here, we present a...
2022-09-07 | MTBLS3873 | MetaboLights
TranscriptomicsContribution of Veillonella parvula to Pseudomonas aeruginosa mediated pathogenicity in a murine tumor model system
We investigated the specific interactions of the most dominant bacterial CF-pathogen, Pseudomonas aeruginosa, and the anaerobic bacterium Veilllonella parvula, that has been recovered at comparable cell numbers in the respiratory tract of CF patients. We used our recently established in-vivo murine ...
ORGANISM(S): Veillonella parvula DSM 2008 
2014-11-06 | E-GEOD-58388 | biostudies-arrayexpress
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