Adventitious roots

Show results for

Unknown (292)
Genomics (76)
Transcriptomics (46)
Proteomics (8)
Metabolomics (2)

Organisms

Arabidopsis thaliana (7)
Zea mays (5)
Oryza sativa (5)
Populus trichocarpa x Populus deltoides (3)
Oryza sativa Japonica Group (3)
Populus trichocarpa (3)
Solanum lycopersicum (2)
Triticum aestivum (2)
Eucalyptus grandis (2)
Capsicum annuum var. glabriusculum (1)
Salix purpurea (1)
Populus tremula (1)
Holcus lanatus (1)
Rubus idaeus (1)
Vitis vinifera (1)
Toxicodendron succedaneum (1)
Pinus contorta (1)
Petunia integrifolia subsp. inflata (1)
Petunia axillaris (1)
Picea sitchensis (1)
Nasturtium officinale (1)
Picea abies (1)
Pyrus ussuriensis (1)
Arabis alpina (1)
Populus davidiana (1)
Populus yunnanensis (1)
Pinus taeda (1)
Picea glauca (1)
Sorghum bicolor (1)
Chrysanthemum x morifolium (1)

Organisms

Arabidopsis thaliana (5)
Oryza sativa (4)
Salix purpurea (3)
Sorghum bicolor (2)
Toxicodendron succedaneum (1)
Juglans hindsii x Juglans regia (1)
Liriodendron (1)
Pinus contorta (1)
Populus trichocarpa x Populus deltoides (1)
Nasturtium officinale (1)
Arabis alpina (1)
Pyrus ussuriensis (1)
Castanea sativa (1)
Panax ginseng (1)
Cenchrus americanus (1)
Populus alba x Populus x berolinensis (1)
Nelumbo nucifera (1)
Chrysanthemum x morifolium (1)
Vaccinium corymbosum (1)
Picea abies (1)
Cucurbita moschata (1)
Populus trichocarpa (1)
Camellia sinensis (1)
Eucalyptus camaldulensis (1)
Bupleurum chinense (1)
Solanum lycopersicum (1)
Ipomoea batatas (1)
Eucalyptus grandis (1)
Zea mays (1)
Oryza sativa Japonica Group (1)

Repository

ENA (76)
biostudies-arrayexpress (24)
geo (22)
pride (5)
iProX (3)
GNPS (1)
MetaboLights (1)

Tissue

Plant cell (3)
Root (2)
Whole plant (2)
Hairy root culture (1)

Disease

Wounds and Injuries (1)

Technology Type

Mass Spectrometry (5)
Shotgun proteomics (5)
HDMSE (2)
Mass spectrometry assay (1)

Instrument Platform

Illumina NovaSeq 6000 (4)
ArrayWoRx Biochip Reader [Applied Precision] (1)
Illumina Genome Analyzer II (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Xevo G2 Q-Tof (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2022 (7)
2024 (6)
2013 (6)
2012 (5)
2019 (5)
2023 (4)
2014 (4)
2026 (3)
2021 (3)
2018 (2)
2016 (2)
2010 (2)
2008 (2)
2007 (2)
2015 (1)
2025 (1)
2004 (1)

Metabolite Name

Heme O (1)
Bromobenzene-2,3-oxide (1)
(6-carboxy-3,4,5-trihydroxyoxan-2-yl)({4-[7-(3,4-dihydroxy-5-methoxyphenyl)-6,11-dihydroxy-2,8-dioxatricyclo[7.3.1.0â?Â¹Â³]trideca-1(13),4,6,9,11-pentaen-3-ylidene]cyclohexa-2,5-dien-1-ylidene})oxidanium (1)
Cyclopassifloside I (1)
Chloroprocaine (1)
Dihydro-4,6-dimethyl-4H-1,3,5-dithiazine (1)
Albanin H (1)
Glyceryl lactopalmitate (1)
O-O-sulfate rosiglitazone (1)
2-trans-Hydroxycyclohexyl glyburide (1)
Di-2-propenyl pentasulfide (1)
Armillaricin (1)
(3b,5a,25R)-3-Hydroxyspirostan-6-one 3-[2-acetylarabinosyl-(1->6)-glucoside] (1)
8-Hydroxyluteolin 4'-methyl ether 8-glucuronide (1)
6-Hydroxykaempferol 3,6-diglucoside 7-glucuronide (1)
(R)-Kanzonol Y (1)
Isomelitric acid A (1)
{[4-(5-{3-[2,4-dihydroxy-5-(3-methylbut-2-en-1-yl)phenyl]-2-hydroxy-3-oxopropyl}-2-hydroxyphenyl)-2-methylbut-2-en-1-yl]oxy}sulfonic acid (1)
Gladiatoside C2 (1)
5-hydroxy-2-(4-hydroxy-3-methoxyphenyl)-6,8-bis[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-7-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]-4H-chromen-4-one (1)
{3-[(2E)-3-phenylprop-2-enoyl]phenyl}oxidanesulfonic acid (1)
(E)-2',4,4',6'-Tetrahydroxy-3',5'-diprenylchalcone (1)
BL III (1)
6-({16,18-dioxo-6,8,19-trioxapentacyclo[10.7.0.0Â²,â?0Â³,â?0Â¹Â³,Â¹â·]nonadeca-1(12),2(9),4,10,13(17)-pentaen-11-yl}oxy)-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
Aurasperone B (1)
[(6-{[5,7-dihydroxy-2-(4-oxocyclohexa-2,5-dien-1-ylidene)-2H-chromen-3-yl]oxy}-3,4,5-trihydroxyoxan-2-yl)methyl][1-hydroxy-3-(4-hydroxyphenyl)prop-2-en-1-ylidene]oxidanium (1)
Neocasomorphin (1)
Apigenin 6-C-glucoside 8-C-arabinoside (1)
UDP-D-Xylose (1)
Theogallinin (1)

First Public Date

2024 (15)
2026 (11)
2018 (8)
2014 (8)
2025 (7)
2021 (7)
2023 (5)
2022 (5)
2020 (4)
2019 (4)
2017 (1)
2013 (1)

Study type

Transcription profiling by array (14)
RNA-seq of coding RNA (9)
Transcription profiling by tiling array (1)

Release Date

2022 (40)
2024 (39)
2023 (34)
2025 (34)
2019 (23)
2020 (21)
2021 (20)
2017 (19)
2014 (16)
2018 (12)
2013 (11)
2016 (10)
2015 (10)
2012 (6)
2011 (5)
2003 (4)
2002 (4)
2008 (3)
2010 (2)
2007 (2)
2026 (1)

Lab affiliation

Center for Biotechnology and Department of Botany, Federal University of Rio Grande do Sul, Porto Alegre, P.O. Box 15005, 91501-970, Brazil (2)
Dpt. Biologia, Sanidad y Medio ambiente Fac. Farmacia y Ciencias de la Alimentacion Univ. Barcelona Av.Joan XIII, 27-31 08028 Barcelona SPAIN (1)
School of Horticulture and Plant Protection, Yangzhou University, Jiangsu, P. R. China (1)
School of Life Sciences, University of Warwick, Coventry, United Kingdom (1)

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RNA-seq analysis of Catharanthus roseus adventitious roots

PRJEB22378 | ENA

Uncovering protein regulation during adventitious root formation in Platycladus orientalis cuttings

Cell totipotency and pluripotency are the cellular basis for root regeneration in Platycladus orientalis cuttings, and the regeneration of adventitious roots is a key determinant for improving stem-cutting. However, the cellular basis and physiological regulation of adventitious root formation are s...

ORGANISM(S): Platycladus Orientalis

2024-05-24 | PXD052541 |

Transcriptomics of lateral root initiation in Maize

We developed a method to synchronize the induction of lateral roots in primary and adventitious roots of Zea mays, and used it to perform a genome-wide transcriptome analysis of the pericycle cells in front of the phloem poles during lateral root initiation. Lateral roots were induced in primary and...

ORGANISM(S): Zea mays

2013-07-16 | E-GEOD-45691 | biostudies-arrayexpress

Oxygen absorption by adventitious roots promotes the survival of completely submerged terrestrial plants.

Not available

S-EPMC5055620 | biostudies-literature

Ginseng adventitious roots

PRJNA980200 | ENA

Transcriptome profiling and comparative analysis of Panax ginseng adventitious roots.

Not available

S-EPMC4213845 | biostudies-literature

Ginseng adventitious roots and ginseng hairy roots

PRJNA1001902 | ENA

Role of adventitious roots in water relations of tamarack (Larix laricina) seedlings exposed to flooding.

Not available

S-EPMC3431261 | biostudies-literature

Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa).

Internal aeration is crucial for root growth in waterlogged soil. A barrier to radial oxygen loss (ROL) can enhance long- distance oxygen transport via the aerenchyma to the root tip; a higher oxygen concentration at the apex enables root growth into anoxic soil. The ROL barrier is formed within the...

ORGANISM(S): Oryza sativa

2014-06-26 | E-GEOD-58804 | biostudies-arrayexpress

Transcriptome sequencing of tomato adventitious roots

PRJNA1139373 | ENA

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424 Results

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