Agave - OmicsDI

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Genomics (272)
Unknown (198)
Proteomics (3)
Transcriptomics (2)
Metabolomics (1)

Organisms

Colinus virginianus (1)
Saccharomyces cerevisiae (1)
uncultured microorganism (1)
Salvelinus alpinus (1)
Modiolus kurilensis (1)
Tetraponera rufonigra (1)
Euterpe oleracea (1)
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Palaeoloxodon sp. (1)
unclassified Bacillus subtilis group (1)
Epinephelus costae (1)
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Capra pyrenaica (1)
Pseudomonas denitrificans (nom. rej.) (1)
Escherichia phage M13 (1)
Suidae (1)
Enterobacteria phage f2 (1)
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Enterobacteria phage ES18 (1)
Solidesulfovibrio magneticus RS-1 (1)
Nitrosospira multiformis (1)
Salmonella phage P22 (1)
unclassified Pseudomonas fluorescens group (1)
Ovis aries musimon (1)

Organisms

plant metagenome (16)
Agave deserti (12)
Agave amica (8)
(Agave angustifolia x Agave amaniensis) x Agave amaniensis (7)
Agave tequilana (7)
Agave sisalana (6)
rhizosphere metagenome (6)
Agave angustifolia (5)
Agave americana (4)
Maudiozyma humilis (4)
Agave macracantha (4)
Agave chrysantha (4)
Echinoagave striata (4)
bioreactor metagenome (4)
Agave fourcroydes (3)
Agave karwinskii (3)
Agave amaniensis (3)
Leptonycteris yerbabuenae (3)
Agave palmeri (3)
Agave verdensis (3)
Agave durangensis (2)
Agave attenuata (2)
Yokenella regensburgei (2)
Agave virginica (2)
fermentation metagenome (2)
Agave potatorum (1)
Priestia aryabhattai B8W22 (1)
Microbacterium testaceum StLB037 (1)
Streptomyces sp. VMFN-G11Ma (1)
Paenibacillus sp. VMFN-D1 (1)

Repository

ENA (272)
MassIVE (2)
biostudies-arrayexpress (1)
geo (1)
MetaboLights (1)
pride (1)

Tissue

Plantlet (1)

Technology Type

Mass spectrometry (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

6530B Q-TOF LC/MS (1)
LTQ Orbitrap (1)
5975C Series GC/MSD (Agilent) (1)

Publication Date

2017 (2)
2015 (1)
2022 (1)
2016 (1)
2024 (1)

CHEBI ID

CHEBI:20582 (1)
CHEBI:33947 (1)
CHEBI:16392 (1)
CHEBI:75610 (1)
CHEBI:75577 (1)
CHEBI:75752 (1)
CHEBI:138667 (1)
CHEBI:138666 (1)
CHEBI:138665 (1)
CHEBI:17327 (1)
CHEBI:42383 (1)
CHEBI:61572 (1)
CHEBI:28623 (1)
CHEBI:16016 (1)
CHEBI:24814 (1)
CHEBI:69081 (1)
CHEBI:16164 (1)
CHEBI:17301 (1)
CHEBI:28260 (1)
CHEBI:77131 (1)
CHEBI:27469 (1)
CHEBI:17521 (1)
CHEBI:30805 (1)
CHEBI:22470 (1)
CHEBI:17992 (1)
CHEBI:27432 (1)
CHEBI:22652 (1)
CHEBI:16971 (1)
CHEBI:17505 (1)
CHEBI:87770 (1)

Metabolite Name

Sinapic acid (1)
Ascorbic acid (1)
15.37 437 361 217 315 sugar (1)
14.80 437 361 217 385 369 sugar (1)
14.73 437 361 217 385 413 sugar (1)
5-hydroxyferulic acid (1)
13.27 249 feruloyl-glycoside (1)
11.79 140 115 287 285 (1)
11.74 435 345 (1)
11.31 393 303 257 217 (1)
11.15 174 394 336 306 (1)
11.07 401 (1)
11.07 313 401 343 326 (1)
11.03 393 504 (1)
10.86 306 288 273 259 231 (1)
10.67 228 301 324 (1)
Xylono-1,4-lactone (1)
Myo-inositol 1-phosphate (1)
18.47 386 296 sterol (1)
15.73 202 497 indole (1)
Monolinolenin (1)
1-linoleoyl-rac-glycerol (1)
Alpha-monopalmitin (1)
13.9 203 216 272 326 410 425 (1)
Galactopyranosylglycerol (1)
12.64 indole 202 362 247 (1)
Brassicin (1)
Indole-3-methanol (1)
11.37 indole 202 247 174 172 (1)
11.24 450 217 dehydro sugar (1)

First Public Date

2025 (67)
2016 (42)
2023 (32)
2021 (26)
2015 (17)
2024 (16)
2019 (16)
2026 (13)
2020 (12)
2017 (8)
2022 (7)
2018 (7)
2014 (6)
2013 (3)

Classification

bacteria (11)

Study type

Transcription profiling by array (1)

Release Date

2025 (27)
2020 (26)
2022 (21)
2021 (20)
2024 (18)
2023 (16)
2019 (12)
2014 (10)
2018 (9)
2016 (9)
2015 (8)
2017 (5)
2013 (5)
2026 (4)
2012 (3)
2011 (2)
2009 (1)
2008 (1)
2007 (1)
2006 (1)

Lab affiliation

Instituto de Ecología A.C. (1)

Tags

pathogen (11)
pathogen:bacterium (11)
xref:PubMed:38646443 (6)
xref:PubMed:29069476 (2)
xref:PubMed:35234491 (1)

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Transcript, protein and metabolite temporal dynamics in the CAM plant Agave

Already a proven mechanism for drought sustainability, crassulacean acid metabolism (CAM) is a specialized type of photosynthesis that maximizes water-use efficiency (WUE) via an inverse (compared to C3 and C4 photosynthesis-performing species) day/night pattern of stomatal closure/opening to shift ...

2017-10-13 | MTBLS363 | MetaboLights

(Agave angustifolia x Agave amaniensis) x Agave amaniensis

(Agave angustifolia x Agave amaniensis) x Agave amaniensis Raw sequence reads

PRJNA1055713 | ENA

(Agave angustifolia x Agave amaniensis) x Agave amaniensis

(Agave angustifolia x Agave amaniensis) x Agave amaniensis Raw sequence reads

PRJNA1250179 | ENA

Agave cupreata

PRJNA956101 | ENA

Agave macracantha

Agave macroacantha

PRJNA929233 | ENA

Agave chiapensis

Agave chiapensis

PRJNA929232 | ENA

Genome of Agave hybrid NO.11648

PRJNA1057571 | ENA

agave sisalana Transcriptome

PRJNA852945 | ENA

agave sisalana Transcriptome

PRJNA852936 | ENA

Agave amaniensis

Agave amaniensis Raw sequence reads

PRJNA917773 | ENA

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