Ahmed Ahmed A - OmicsDI

Show results for

Unknown (13653)
Transcriptomics (163)
Proteomics (156)
Genomics (102)
Metabolomics (24)
Models (12)
Other (1)

Organisms

Homo sapiens (216)
Mus musculus (70)
Arabidopsis thaliana (21)
Saccharomyces cerevisiae (10)
Caenorhabditis elegans (9)
Rattus norvegicus (6)
Gallus gallus (4)
Bos taurus (3)
Haemophilus influenzae (2)
Sus scrofa (2)
Scopulariopsis sp. (2)
Escherichia coli (1)
Severe acute respiratory syndrome-related coronavirus (1)
Arabidopsis lyrata subsp. lyrata (1)
Pristionchus pacificus (1)
Cupriavidus metallidurans CH34 (1)
Francisella tularensis subsp. novicida (1)
Plasmodium yoelii (1)
Apis mellifera (1)
Oryza sativa (1)
Ovis aries (1)
Triticum aestivum (1)
Drosophila melanogaster (1)
Beauveria sp. (1)
Haemaphysalis doenitzi (1)
Nicotiana tabacum (1)
cellular organisms (1)
Staphylococcus (1)
Staphylococcus aureus (1)
Staphylococcus capitis (1)

Organisms

Mus musculus (4)
Homo sapiens (3)
Mycobacterium intracellulare subsp. intracellulare MTCC 9506 (1)
Lacticaseibacillus paracasei (1)
Enterococcus mundtii (1)
Enterococcus faecium (1)

Repository

biostudies-arrayexpress (178)
pride (121)
EGA (63)
ENA (24)
MassIVE (22)
MetaboLights (16)
BioModels (12)
GNPS (8)
PanoramaPublic (7)
iProX (4)
geo (1)
GPMDB (1)
jPOST (1)
PeptideAtlas (1)

Tissue

Cell culture (25)
Brain (10)
Blood plasma (9)
Whole body (7)
B cell (6)
Fibroblast (6)
Epithelial cell (5)
Permanent cell line cell (5)
Retina (5)
Primary cell (4)
Retinal cell (4)
Urine (4)
Blood (3)
Blood cell (3)
Liver (3)
Pancreas (3)
Plant cell (3)
Skin (3)
Blood serum (2)
Bone marrow (2)
Cell suspension culture (2)
Cerebrospinal fluid (2)
Kidney (2)
Leaf (2)
Spermatozoon (2)
Stem cell (2)
Others (1)
Bile (1)
Bile duct (1)
Blood-lymph (1)

Disease

Acute leukemia (6)
Brain cancer (4)
Disease free (4)
Retinal degeneration (4)
Breast cancer (3)
Cervix carcinoma (3)
Cancer (2)
Normal (2)
Alzheimer's disease (2)
Lymphoma (2)
Neuroblastoma (2)
Type 1 diabetes mellitus (2)
Benign glioma (1)
Cocaine addiction (1)
Hepatocellular carcinoma (1)
Midgut carcinoid liver metastasis (1)
Prostate cancer (1)
Not Available (1)
Adenocarcinoma (1)
Autism spectrum disorder (1)
COVID-19 (1)
Childhood extraosseous osteosarcoma (1)
Cholangiocarcinoma (1)
Chronic bronchitis (1)
Colon cancer (1)
Duchenne muscular dystrophy (1)
Embryonal rhabdomyosarcoma (1)
Fibrosarcoma (1)
Gastroesophageal cancer (1)
Head and neck cancer (1)

Technology Type

Mass Spectrometry (121)
Shotgun proteomics (55)
Bottom-up proteomics (24)
Data-dependent acquisition (13)
Data-independent acquisition (12)
Mass spectrometry (11)
Gel-based experiment (10)
Affinity purification coupled with mass spectrometry proteomics (9)
SWATH MS (8)
Mass spectrometry assay (5)
Top-down proteomics (5)
Affinity proteomics (2)
Complete Genomics (COMPLETE_GENOMICS) (1)
ILLUMINA, Illumina HiSeq 4000, Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, NextSeq 500, ILLUMINA (1)
OXFORD_NANOPORE, MinION (1)
NMR spectroscopy assay (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
HDMSE (1)
Immunopeptidomics (1)
SRM/MRM (1)
SomaScan affinity proteomics (1)

Instrument Platform

Q Exactive (6)
Illumina HiSeq 4000 (4)
TripleTOF 5600+ (4)
Orbitrap Fusion Lumos (4)
Microcentrifuge (2)
ScanArray scanning hardware (2)
Ion Torrent S5 XL (2)
6545 Quadrupole Time-of-Flight (2)
6545 Quadrupole Time-of-Flight (Agilent) (2)
Q Exactive HF-X (2)
Orbitrap Fusion (2)
Non (1)
Axon Instruments GenePix 4000B scanner (1)
Perkin Elmer, USA (1)
Agilent Technologies Microarray Scanner (1)
None (1)
Illumina (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Instrument (1)
6140 Quadrupole LC/MS (1)
6530C Q-TOF LC/MS (Agilent instrument model) (1)
6550 iFunnel Q-TOF LC/MS (1)
LTQ Orbitrap Velos Pro (1)
MALDI Synapt G2-S HDMS (1)
Orbitrap Fusion ETD (1)
Q Exactive HF (1)
Q Exactive Plus (1)
Q-Exactive H-FX (1)

Publication Date

2024 (43)
2011 (31)
2013 (29)
2022 (28)
2012 (27)
2026 (25)
2014 (22)
2025 (20)
2015 (20)
2021 (19)
2023 (18)
2016 (16)
2020 (14)
2010 (14)
2019 (11)
2018 (10)
2008 (5)
2017 (5)
2007 (4)
2006 (3)
2009 (2)

UNIPROT ID/AC

O14467 (1)
O75582 (1)
O75676 (1)
P00546 (1)
P08153 (1)
P11746 (1)
P17612 (1)
P20438 (1)
P24869 (1)
P25963 (1)
P26309 (1)
P27636 (1)
P28482 (1)
P29965 (1)
P30283 (1)
P32562 (1)
P37231 (1)
P38634 (1)
P38987 (1)
P40316 (1)
P41813 (1)
P47035 (1)
P53197 (1)
P68400 (1)
Q00684 (1)
Q03018 (1)
Q08887 (1)
Q13547 (1)
Q15759 (1)
Q99558 (1)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:29016 (8)
CHEBI:18237 (7)
CHEBI:28044 (7)
CHEBI:30769 (7)
CHEBI:16811 (6)
CHEBI:18186 (6)
CHEBI:22660 (6)
CHEBI:27570 (6)
CHEBI:28300 (6)
CHEBI:15354 (5)
CHEBI:15676 (5)
CHEBI:16235 (5)
CHEBI:16335 (5)
CHEBI:16450 (5)
CHEBI:16704 (5)
CHEBI:16708 (5)
CHEBI:16742 (5)
CHEBI:17568 (5)
CHEBI:17750 (5)
CHEBI:17775 (5)
CHEBI:17822 (5)
CHEBI:22653 (5)
CHEBI:24898 (5)
CHEBI:25017 (5)
CHEBI:25094 (5)
CHEBI:26271 (5)
CHEBI:27266 (5)
CHEBI:27897 (5)
CHEBI:28445 (1)
CHEBI:71417 (1)

Metabolite Name

Allantoin (4)
Tryptophan (4)
Tyrosine (4)
Uridine (4)
Xanthosine (4)
AMP (3)
Adenine (3)
Adenosine (3)
Alanine (3)
Arginine (3)
Aspartate (3)
CMP (3)
Citric acid (3)
Citrulline (3)
Cysteine (3)
Ergothioneine (3)
Fumarate (3)
Glutamate (3)
Glutamine (3)
Glycerate (3)
Glycine (3)
Guanine (3)
Histidine (3)
Hypoxanthine (3)
Isoleucine (3)
Lactate (3)
Leucine (3)
Lysine (3)
Methionine (3)
Methionine (3)

First Public Date

2026 (4)
2025 (3)
2021 (3)
2024 (2)
2022 (2)
2020 (2)
2019 (2)
2018 (2)
2023 (1)
2017 (1)
2014 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (5)
Computational model (2)
Mathematical model (1)
Other (1)
Partial differential equation model (1)
Population model (1)

Lab affiliation

Department of Chemistry, Imperial College London, Molecular Sciences Research Hub, London, W12 0BZ, UK The Francis Crick Institute, London, NW1 1AT, UK (4)
Center for Translational Vision Research, Department of Ophthalmology, Gavin Herbert Eye Institute, University of California, Irvine, Irvine, CA, 92697, USA; Department of Physiology and Biophysics, Department of Chemistry, Department of Molecular Biology and Biochemistry; University of California, Irvine, Irvine, CA, 92697, USA (3)
Genomics Research Center, Academia Sinica, Taipei, Taiwan (3)
Boston Children's Hospital and Harvard Medical School (2)
CRUK Beatson Institute, Switchback Road, Glasgow G61 1BD, UK. (2)
Max Planck Unit for the Science of Pathogens Charitéplatz 1,D-10117 Berlin, Germany (2)
Professor Louisiana State University Department of Biological Sciences (2)
School of Biology, Biomedical Sciences Research Complex, University of St Andrews (2)
1. Research Institute for Medical and Health Sciences, University of Sharjah, Sharjah, United Arab Emirates. 2. College of Pharmacy, Department of Medicinal Chemistry, University of Sharjah, United Arab Emirates (1)
1.Precision Vaccines Program, Division of Infectious Diseases, Boston Children’s Hospital, Boston, MA, USA. 2. Department of Pediatrics, Harvard Medical School, Boston, MA, USA. (1)
Baylor College of Medicine, Houston, Texas, USA (1)
Boston Children's Hospital (1)
Boston Childrens Hospital Steen Lab Department of Pathology Boston, MA, USA (1)
CRCM, INSERM, CNRS, Institut Paoli-Calmette, Aix-Marseille University, 27 Boulevard Leï Roure, 13009, Marseille, France (1)
CRCM, INSERM, CNRS, Institut Paoli-Calmettes, Aix-Marseille Univ. , 27 Boulevard Leï Roure, 13009, Marseille, France (1)
Cancer Science Institute of Singapore (CSI), National University of Singapore (NUS) (1)
Cell Biology, Gygi Lab, Harvard medical School, Boston, MA (1)
Center for Biotechnology & Genomic Medicine, Department of Ophthalmology, Medical College of Georgia, Augusta University, USA (1)
Center for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta University, Augusta, GA, UnitedStates (1)
Center for Reproductive Evolution, Department of Biology, Syracuse University, United States of America (1)
Centre de Recherche en Cancérologie de Marseille, CRCM Inserm UMR1068, CNRS UMR7258, Aix Marseille Université U105, Institut Paoli Calmettes 27 Boulevard Leï Roure CS30059 13273 Marseille Cedex 09 France (1)
Centre de recherche hopital Maisonneuve Rosemont (1)
Chapman University School of Pharmacy (1)
Cornell University (1)
DZNE Munich Neuroproteomics Feodor-Lynen Str. 17 81377 Munich Germany (1)
Departement de Chimie, Biochimie et Physisque, Université du Québec à Trois-Rivières (1)
Department of Biochemistry and Molecular Biology and The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria, 3010, Australia. (1)
Department of Biochemistry and Molecular Biology, Drexel University College of Medicine. Translational Cellular Oncology Program, Sidney Kimmel Cancer Center, Thomas Jefferson University (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biology, Institute of Molecular Systems iiology, ETH Zürich, Switzerland (1)