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ProteomicsA workflow towards the reproducible identification and quantitation of protein carbonylation sites in human plasma
Protein carbonylation has been consistently used as a marker of excessive oxidative stress and studied in the context of multiple human oxidative stress related diseases. The variety of carbonyl post-translational modifications (PTMs) and their low abundance on easily accessible diagnostic tissues (...
ORGANISM(S): Homo sapiens (Human) 
2021-03-02 | PXD023738 | Pride
Protein carbonylation Lc-twims-ms/ms Aldehyde reactive probe (arp) Human plasma Biotin-avidin affinity 
ProteomicsScreening of protein carbonylation sites in human serum by ion mobility mass spectrometry
Excessive oxidative stress, which is associated with several diseases, can trigger oxidative protein modifications, including protein carbonylation, which refers to the oxidative formation of aldehyde or keto groups in proteins. The structural diversity of these non-enzymatic reactive carbonyl group...
ORGANISM(S): Homo Sapiens 
PXD058666 | panorama
TranscriptomicsReactivity-dependent profiling of RNA 5-methylcytidine dioxygenases [II]
We adapted the Aldehyde reactive probe (ARP; O-(biotinylcarbazoylmethyl) hydroxylamine) pulldown method to map ALKBH1 dependent targets in a transcriptome-wide manner.
ORGANISM(S): Homo sapiens 
2022-06-28 | GSE202814 | GEO
GenomicsReactivity-dependent profiling of RNA 5-methylcytidine dioxygenases [II]
Reactivity-dependent profiling of RNA 5-methylcytidine dioxygenases [II]
PRJNA837406 | ENA
UnknownSite-specific protein adducts of 4-hydroxy-2(E)-nonenal in human THP-1 monocytic cells: protein carbonylation is diminished by ascorbic acid.
Not available
S-EPMC2825578 | biostudies-literature
UnknownLabel-Free Proteomics Assisted by Affinity Enrichment for Elucidating the Chemical Reactivity of the Liver Mitochondrial Proteome toward Adduction by the Lipid Electrophile 4-hydroxy-2-nonenal (HNE).
Not available
S-EPMC4865762 | biostudies-literature
Genomicsm7G methylation by METTL1 regulates let-7 microRNAs [m7G-RIP-Seq KD A549]
m7G methylation by METTL1 regulates let-7 microRNAs [m7G-RIP-Seq KD A549]
PRJNA493090 | ENA
Genomicsm7G methylation by METTL1 regulates let-7 microRNAs [BoRed-Seq & m7G-RIP-Seq A549]
m7G methylation by METTL1 regulates let-7 microRNAs [BoRed-Seq & m7G-RIP-Seq A549]
PRJNA445178 | ENA
Genomicsm7G methylation by METTL1 regulates let-7 microRNAs [m7G-RIP-Seq Caco2]
m7G methylation by METTL1 regulates let-7 microRNAs [m7G-RIP-Seq Caco2]
PRJNA493087 | ENA
TranscriptomicsPleiotropic actions of miR-153 support colorectal cancer progression by enhanced invasion and chemotherapy resistance
MiRNA expression profiling in 2 colorectal cancer cell lines derived from the same individual.
ORGANISM(S): Homo sapiens 
2012-02-02 | E-MEXP-3270 | biostudies-arrayexpress
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