Ale - OmicsDI

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UNIPROT ID/AC

A0A1S3MBI7 (1)
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A0A1S3P297 (1)
A0A1S3P8N0 (1)
A0A1S3PB08 (1)
A0A1S3N1B9 (1)
C0HBN7 (1)
A0A1S3LIF1 (1)

CHEBI ID

CHEBI:13097 (1)
CHEBI:21278 (1)
CHEBI:63163 (1)
CHEBI:6209 (1)
CHEBI:44590 (1)
CHEBI:21260 (1)
CHEBI:44513 (1)
CHEBI:6206 (1)
CHEBI:44708 (1)
CHEBI:44466 (1)
CHEBI:13094 (1)
CHEBI:47822 (1)
CHEBI:60107 (1)
CHEBI:21486 (1)
CHEBI:60111 (1)
CHEBI:43088 (1)
CHEBI:47823 (1)
CHEBI:28538 (1)
CHEBI:47819 (1)
CHEBI:47821 (1)
CHEBI:21601 (1)
CHEBI:7203 (1)
CHEBI:77859 (1)
CHEBI:19473 (1)
CHEBI:11524 (1)
CHEBI:1021 (1)
CHEBI:12542 (1)
CHEBI:47984 (1)
CHEBI:1022 (1)
CHEBI:42925 (1)

Metabolite Name

Glyceric acid (1)
Pyruvic acid (1)
2-ketoglutaric acid (1)
2-hydroxyglutaric acid (1)
Ribitol (1)
5-oxoproline (1)
Lactic acid (1)
Serine (1)
Glycine (1)
Glycerol (1)
Succinic acid (1)
Fumaric acid (1)
Malic acid (1)
Putrescine (1)
Ornithine (1)
Stearic acid (1)
Palmitic acid (1)
Oleic acid (1)
Glucose (1)
Inositol (1)

IsPrivate

False (2)

Submitter Keywords

Manuscript Accepted (1)

First Public Date

2024 (32)
2026 (28)
2025 (23)
2021 (19)
2023 (16)
2020 (13)
2022 (9)
2019 (6)
2018 (5)
2017 (5)
2016 (5)
2014 (2)
2015 (1)

Classification

bacteria (23)

Modelling Approach

Agent-based model (1)
Constraint-based model (1)

Study type

RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (3)
DNA-seq (2)
Transcription profiling by array (2)
RNA-seq of non coding RNA (2)

Release Date

2023 (93)
2022 (93)
2025 (81)
2024 (78)
2021 (78)
2020 (53)
2019 (51)
2018 (32)
2017 (30)
2016 (28)
2015 (17)
2014 (16)
2026 (11)
2012 (8)
2009 (8)
2010 (7)
2013 (5)
2011 (3)
2008 (2)
2005 (2)
2006 (1)
2003 (1)
2000 (1)

Lab affiliation

Australian Institute for Bioengineering and Nanotechnology, The University of Queensland (2)
Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST) (2)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (2)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany. Wellcome Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom. (1)
Department of Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST) (1)
EMBL (1)
EMBL Heidelberg (1)
ERA Chair in Gas Fermentation Technologies, Institute of Technology, University of Tartu, Tartu, Estonia (1)
Freie Universität Berlin; Department of Biology, Chemistry, Pharmacy; Institute of Chemistry and Biochemistry; Berlin/Germany (1)
Iowa State University, Department of Chemical and Biological Engineering (1)
King's College London, Dept. of Basic and Clinical Neuroscience, Maurice Wohl Clinical Neuroscience Institute, 5 Cutcombe Road, London, SE5 9NU (1)
LAb of molecular bacteriology, Rega Institute, KU Leuven (1)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (1)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (1)
ValgepeaLab, Institute of Bioengineering, University of Tartu (1)
biOMICS Mass Spectrometry Facility Department of Biomedical Science Centre for Membrane Interactions and Dynamics (CMIAD) E-04, Florey building Firth Court, Western Bank The University of Sheffield Sheffield S10 2TN United Kingdom (1)

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Schizochytrium sp. ALE-HG20

Schizochytrium sp. ALE-HG20 Raw sequence reads

PRJNA1033519 | ENA

RNAseq analysis of global gene expression patterns in Corynebacterium glutamicum Adaptive Laboratory Evolution (ALE) strains GluA T5 and GluA T7 with accelerated growth and glutarate production.

The Adaptive Laboratory Evolution (ALE) experiment allowed to select Corynebacterium glutamicum strain GluA T5, which grew faster and produced more glutarate than the parent strain GluA T0, and strain GluA T7 that grew as fast as GluA T5, but produced more 5AVA than GluA T5. To explore differences i...

ORGANISM(S): Corynebacterium glutamicum ATCC 13032

2021-01-31 | E-MTAB-10025 | biostudies-arrayexpress

Parameter Estimation and Species Tree Rooting Using ALE and GeneRax.

Not available

S-EPMC10373948 | biostudies-literature

Mutation analysis of the histidine residues in the glycylglycine endopeptidase ALE-1.

Not available

S-EPMC543547 | biostudies-literature

Sequence of ALE strains

PRJNA1031812 | ENA

Systematic profiling of Hefeweizen ale yeast across fermentation and repitching reveals global trends in protein dynamics during brewing

Studying the genetic and molecular characteristics of brewing yeast strains is crucial for understanding their domestication history and adaptations accumulated over time in fermentation environments, and for guiding optimizations to the brewing process itself. Saccharomyces cerevisiae (brewing yeas...

ORGANISM(S): Saccharomyces Sp. (ncbitaxon:4935)

2023-08-30 | MSV000092793 | MassIVE

Educational Leave as a Time Resource for Participation in Adult Learning and Education (ALE).

Not available

S-EPMC6987466 | biostudies-literature

Recoverable resources from pot ale & spent wash from Scotch Whisky production.

Not available

S-EPMC8803549 | biostudies-literature

A new anabolic compound, LLP2A-Ale, reserves periodontal bone loss in mice through augmentation of bone formation.

Not available

S-EPMC7664094 | biostudies-literature

Model-guided ALE for improving production