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TranscriptomicsSaccharomyces cerevisiae BY4741 cells treated with n-alkanes
Transcripitonal profiling of Saccharomyces cerevisiae treated with 2% n-alkanes vs untreatment Multiple condition experiment, S. cerevisiae treated with n-alkanes (n-nonane, n-decane, n-undecane, n-dodecane, respectively) for 24hrs or 48hrs, compared to control (those without treatment)
ORGANISM(S): Saccharomyces cerevisiae 
2015-04-07 | E-GEOD-38653 | biostudies-arrayexpress
GenomicsTranscriptomic analysis of cyanobacterial alkane production
Transcriptomic analysis of cyanobacterial alkane production
PRJNA590266 | ENA
TranscriptomicsTranscriptomic analysis of cyanobacterial alkane production
To identify transcriptional adaptations associated with increased alkane production in Nostoc punctiforme, we performed comparative transcriptomic analysis of an alkane overproduction strain. RNA-seq data identified a large number of highly up-regulated genes in the overproduction strain potentially...
ORGANISM(S): Nostoc punctiforme PCC 73102 
2019-11-19 | GSE140625 | GEO
GenomicsYarrowia lipolytica strain:Yli_C16 alkane
Yarrowia lipolytica Yli_C16 alkane resequencing
PRJNA1344145 | ENA
GenomicsYarrowia lipolytica strain:Yli_C16 alkane
Yarrowia lipolytica Yli_C16 alkane resequencing
PRJNA1339128 | ENA
GenomicsYarrowia lipolytica strain:Yli_C16 alkane
Yarrowia lipolytica Yli_C16 alkane resequencing
PRJNA1339130 | ENA
MetabolomicsCandidatus Alkanophaga archaea from Guaymas Basin hydrothermal vent sediment oxidize petroleum alkanes
Methanogenic and methanotrophic archaea produce and consume the greenhouse gas methane, respectively, using the reversible enzyme methyl-coenzyme M reductase (Mcr). Recently, Mcr variants that can activate multi-carbon alkanes have been recovered from archaeal cultures. These enzymes, called alkyl-c...
2025-07-07 | MTBLS7727 | MetaboLights
ModelsFatma2018 - Model of central carbon metabolism of E. coli with additional reactions to investigate potential routes of alkane synthesis
Model of cetnral carbon metabolism of E. coli with additional reactions to investigate potential routes of alkane synthesis
2020-08-01 | MODEL1802080001 | BioModels
ProteomicsQuantitative Proteomics for n-Alkane and Branched Alkane Degradation
DIA-based Quantitative Proteomics for n-Alkane and Branched Alkane Degradation
ORGANISM(S): Dietzia Sp. Cn-3 
2026-08-14 | PXD082560 |
ProteomicsDifferential Protein Expression During Growth on Medium Versus Long-Chain Alkanes in the Obligate Marine Hydrocarbon-Degrading Bacterium Thalassolituus oleivorans MIL-1
The marine obligate hydrocarbonoclastic bacterium Thalassolituus oleivorans MIL-1 metabolises a broad range of aliphatic hydrocarbons almost exclusively as carbon and energy sources. We used LC-MS/MS shotgun proteomics to identify proteins involved in aerobic alkane degradation during growth on medi...
ORGANISM(S): Thalassolituus oleivorans MIL-1 
2019-01-14 | PXD011824 | Pride
Shotgun proteomics Alkane degradation Subterminal oxidation Oil pollution Medium-chain alkanes Hydrocarbonoclastic bacteria Thalassolituus oleivorans Long-chain alkanes 
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