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Unknown
(1341)
Genomics
(382)
Transcriptomics
(32)
Proteomics
(16)
Metabolomics
(5)
Other
(3)
Methylation profiling
(1)
Organisms
Caulobacter vibrioides CB15
(4)
Bacteria
(3)
environmental samples
(3)
Hyphomonas neptunium
(3)
environmental samples
(2)
Pseudo-nitzschia
(2)
Acetobacter aceti NBRC 14818
(2)
Bradyrhizobium japonicum
(2)
Brevundimonas subvibrioides
(2)
Ruegeria pomeroyi
(1)
Methylorubrum extorquens
(1)
Cupriavidus taiwanensis LMG 19424
(1)
Sinorhizobium meliloti
(1)
Paramagnetospirillum magneticum AMB-1
(1)
uncultured marine crenarchaeote
(1)
Rhizobium
(1)
Bradyrhizobium
(1)
Roseovarius
(1)
uncultured Pelagibacterales bacterium
(1)
Skeletonema
(1)
Mesorhizobium
(1)
Thalassiosira
(1)
Candidatus Pelagibacter communis
(1)
Candidatus Pelagibacter sp. HTCC7211
(1)
Candidatus Pelagibacter ubique HTCC1062
(1)
Candidatus Pelagibacter ubique HTCC1002
(1)
Sinorhizobium fredii NGR234
(1)
Dinoroseobacter shibae DFL 12 = DSM 16493
(1)
uncultured marine microorganism
(1)
Novosphingobium aromaticivorans
(1)
Organisms
Alphaproteobacteria bacterium
(27)
soil metagenome
(9)
Paracoccus yeei
(8)
hypersaline lake metagenome
(6)
marine metagenome
(6)
Caulobacter vibrioides CB15
(4)
Hyphomonas neptunium
(3)
Brevundimonas subvibrioides
(2)
Alphaproteobacteria bacterium SCGC AC-337_F16
(2)
Alphaproteobacteria bacterium SCGC AC-337_P14
(2)
Alphaproteobacteria bacterium SCGC AC-312_G09
(2)
Alphaproteobacteria bacterium SCGC AC-312_L08
(2)
Alphaproteobacteria bacterium SCGC AC-312_O23
(2)
Alphaproteobacteria bacterium SCGC AC-312_D23
(2)
Alphaproteobacteria bacterium SCGC AC-312_M04
(2)
Alphaproteobacteria
(2)
Parvibaculaceae
(2)
plant metagenome
(2)
Candidatus Mesenet longicola
(1)
Govanella unica
(1)
Tsuneonella amylolytica
(1)
Paracoccus jeotgali
(1)
Roseobacter sp. NGRO
(1)
alpha proteobacterium SCGC AAA280-B11
(1)
alpha proteobacterium SCGC AAA027-L15
(1)
alpha proteobacterium SCGC AAA027-J10
(1)
alpha proteobacterium SCGC AAA280-P20
(1)
Candidatus Phaeomarinibacter ectocarpi
(1)
Rhodoplanes sp. TEM
(1)
Rhodoplanes tepidamans
(1)
Repository
ENA
(377)
geo
(27)
biostudies-arrayexpress
(14)
pride
(11)
GNPS
(3)
MassIVE
(3)
iProX
(2)
MetaboLights
(2)
Tissue
Cell culture
(1)
Whole body
(1)
Technology Type
Mass Spectrometry
(11)
Shotgun proteomics
(7)
Bottom-up proteomics
(4)
Mass spectrometry
(2)
Data-dependent acquisition
(1)
SRM/MRM
(1)
Instrument Platform
LTQ Orbitrap Elite
(4)
Agilent scanner
(1)
Tecan HS400Pro
(1)
Table centrifuge
(1)
Illumina HiSeq 2000
(1)
MaXis
(1)
Q Exactive
(1)
5975C Series GC/MSD (Agilent)
(1)
Liquid Chromatography MS - alternating - reverse phase
(1)
Publication Date
2022
(10)
2020
(7)
2023
(6)
2013
(5)
2012
(5)
2011
(4)
2024
(4)
2010
(3)
2025
(3)
2019
(3)
2016
(2)
2009
(2)
2026
(2)
2017
(2)
2018
(1)
2007
(1)
2021
(1)
2014
(1)
CHEBI ID
CHEBI:17992
(2)
CHEBI:62510
(1)
CHEBI:24265
(1)
CHEBI:47571
(1)
CHEBI:16488
(1)
CHEBI:27786
(1)
CHEBI:16892
(1)
CHEBI:50385
(1)
CHEBI:27744
(1)
CHEBI:17315
(1)
CHEBI:28915
(1)
CHEBI:15640
(1)
CHEBI:16457
(1)
CHEBI:50678
(1)
CHEBI:21260
(1)
CHEBI:44549
(1)
CHEBI:44111
(1)
CHEBI:77267
(1)
CHEBI:15925
(1)
CHEBI:37574
(1)
CHEBI:84415
(1)
CHEBI:17333
(1)
CHEBI:1157
(1)
CHEBI:30754
(1)
CHEBI:15573
(1)
CHEBI:24741
(1)
CHEBI:27592
(1)
CHEBI:17439
(1)
CHEBI:16551
(1)
CHEBI:4167
(1)
Metabolite Name
Sucrose
(2)
2-O-(alpha-D-glucopyranosyl)-D-glycerate
(1)
Trehalose
(1)
Uridine 5'-monophosphate
(1)
Trigonelline
(1)
Chitotriose
(1)
Homoserine
(1)
Thiamine monophosphate
(1)
Thiamine
(1)
Syringic acid
(1)
S-adenosyl-L-methionine
(1)
O-phospho-L-homoserine
(1)
Pantothenic acid
(1)
Orotic acid
(1)
Nicotinamide adenine dinucleotide phosphate
(1)
N-acetyl glutamic acid
(1)
N-acetyl-D-glucosamine 6-phosphate
(1)
N-acetyl glucosamine
(1)
Muramic acid
(1)
Methylmalonic acid
(1)
Meso-2,6-diaminopimelic acid
(1)
Lumichrome
(1)
Isethionic acid
(1)
Inosine 5'-monophosphate
(1)
Hydroxocobalamin
(1)
Homarine
(1)
4-amino-2-methyl-5-pyrimidinemethanol
(1)
Histidinol
(1)
Hemin
(1)
Glyphosate
(1)
First Public Date
2013
(50)
2014
(40)
2018
(38)
2019
(33)
2020
(29)
2024
(28)
2022
(23)
2017
(23)
2023
(22)
2021
(21)
2026
(20)
2025
(19)
2016
(17)
2015
(12)
2012
(2)
Classification
bacteria
(3)
viruses
(1)
Modification
3x(2)H labeled N6-acetyl-L-lysine
(1)
4x(15)N labeled L-arginine
(1)
Study type
Transcription profiling by array
(8)
Other
(3)
RNA-seq of coding RNA
(2)
Comparative genomic hybridization by array
(1)
Release Date
2022
(134)
2023
(112)
2021
(104)
2018
(94)
2024
(92)
2020
(88)
2019
(86)
2025
(84)
2013
(80)
2016
(78)
2014
(62)
2017
(61)
2015
(60)
2012
(57)
2011
(43)
2010
(28)
2009
(23)
2007
(23)
2006
(14)
2008
(12)
2026
(6)
2004
(5)
2005
(4)
2003
(4)
2002
(1)
Lab affiliation
Department of Microbiology, Oregon State University, Corvallis, Oregon 97331
(1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15, 04318 Leipzig, Germany
(1)
Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis) 370 05, Czech Republic
(1)
Li2D
(1)
Max Planck Institute for Marine Microbiology, Bremen, Germany
(1)
Structural Biology Initiative, CUNY Advanced Science Research Center, New York, NY 10031
(1)
University of Cádiz/IVAGRO
(1)
University of Greifswald Institute of Microbiology Department of Microbial Proteomics Felix-Hausdorff-Str.8 17489 Greifswald
(1)
University of Greifswald, Center for Functional Genomics of Microbes, Institute of Microbiology, Department of Microbial Proteomics
(1)
University of Washington Department of Genome Sciences
(1)
Xiamen University
(1)
Tags
pathogen
(4)
pathogen:bacterium
(3)
xref:PubMed:29701776
(2)
xref:PubMed:33705385
(2)
xref:PubMed:37645952
(2)
xref:PubMed:37972151
(2)
xref:PubMed:36315598
(2)
xref:PubMed:24593847
(1)
xref:PubMed:33454808
(1)
xref:PubMed:22447601
(1)
xref:PubMed:36905873
(1)
xref:PubMed:24477198
(1)
xref:PubMed:25211053
(1)
xref:PubMed:36138466
(1)
xref:PubMed:35920548
(1)
xref:PubMed:36217140
(1)
xref:PubMed:35690846
(1)
xref:PubMed:26375668
(1)
xref:PubMed:37607062
(1)
xref:PubMed:24465807
(1)
xref:PubMed:22467786
(1)
xref:PubMed:30785393
(1)
xref:PubMed:24281717
(1)
xref:PubMed:23475346
(1)
xref:PubMed:31054135
(1)
xref:PubMed:27917168
(1)
xref:PubMed:31427729
(1)
xref:PubMed:23542623
(1)
xref:PubMed:32324740
(1)
xref:PubMed:22556258
(1)
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Alphaproteobacteria
Alphaproteobacteria Raw sequence reads
PRJNA480949
|
ENA
Cite
Alphaproteobacteria bacterium SO-S41
Complete genome sequence of alphaproteobacteria bacterium strain SO-S41
PRJDB11566
|
ENA
Cite
Alphaproteobacteria bacterium
Alphaproteobacteria bacterium overview
PRJNA492613
|
ENA
Cite
uncultured Alphaproteobacteria bacterium
uncultured Alphaproteobacteria bacterium overview
PRJNA982243
|
ENA
Cite
Sponge-associated Alphaproteobacteria
Comparative genomics of sponge-associated Alphaproteobacteria
PRJEB18465
|
ENA
Cite
Alphaproteobacteria bacterium strain:JGI_MCM16SPN084
Alphaproteobacteria bacterium strain:JGI_MCM16SPN084 Genome sequencing
PRJNA585730
|
ENA
Cite
Alphaproteobacteria bacterium strain:JGI_MCM16SPN058
Alphaproteobacteria bacterium strain:JGI_MCM16SPN058 Genome sequencing
PRJNA585731
|
ENA
Cite
Alphaproteobacteria bacterium strain:JGI_MCM16SPL078
Alphaproteobacteria bacterium strain:JGI_MCM16SPL078 Genome sequencing
PRJNA585732
|
ENA
Cite
Alphaproteobacteria bacterium strain:JGI_MCM16SPL060
Alphaproteobacteria bacterium strain:JGI_MCM16SPL060 Genome sequencing
PRJNA585733
|
ENA
Cite
Alphaproteobacteria bacterium strain:JGI_MCM16ME052
Alphaproteobacteria bacterium strain:JGI_MCM16ME052 Genome sequencing
PRJNA585736
|
ENA
Cite
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