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TranscriptomicsTranscription profiling by array of Brachypodium response to increased ambient temperature in seedlings
Microarray analysis on Brachypodium distachyon seedlings was performed to determine the response of the transcriptome to changes in ambient temperature, including identification of marker genes that were up-regulated or down-regulated by a moderate increase in growth temperature. Wild-type Brachypod...
ORGANISM(S): Brachypodium distachyon 
2013-06-07 | E-MEXP-3918 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of wild type Neurospora crassa cells treated with novel antifungal agents
Purpose: Evaluate the transcriptional profile of Neurospora crassa cells treated with a group of novel antifungal compounds Methods: Conidial suspensions were obtained and 1 x 106 cells/ml incubated in minimal medium for 6 hours (26ºC, 140 rpm, constant light) followed by the addition of the indica...
ORGANISM(S): Neurospora crassa 
2015-11-25 | E-GEOD-53040 | biostudies-arrayexpress
MetabolomicsExtreme genome diversity and cryptic speciation in a harmful algal bloom forming eukaryote

Harmful algal blooms (HABs) of the toxic haptophyte Prymnesium parvum are a recurrent problem in many inland and estuarine waters around the world. Strains of P. parvum vary in the toxins they produce and in other physiological traits associated with HABs, but the genetic basis ...

2023-04-26 | MTBLS5893 | MetaboLights
UnknownMycobacterium abscessus l,d-Transpeptidases Are Susceptible to Inactivation by Carbapenems and Cephalosporins but Not Penicillins.
Not available
S-EPMC5610527 | biostudies-literature
TranscriptomicsTranscriptional profiling of staurosporine-induced cell death in wild type versus M-NM-^Tczt-1 in Neurospora crassa
Purpose: Compare the transcriptional profile of staurosporine-treated cells in Neurospora crassa wild type and M-NM-^Tczt-1 (M-NM-^TNCU09974) cells Methods: Conidial suspensions were obtained and 1 x 106 cells/ml incubated in minimal medium for 6 hours (26M-BM-:C, 140 rpm, constant light) followed b...
ORGANISM(S): Neurospora crassa 
2014-07-01 | E-GEOD-52153 | biostudies-arrayexpress
TranscriptomicsEffect of T0901317, AM580 or T0901317+AM580 on monocyte gene expression
The aim of this study was to investigate the effect of T0901317 LXR agonist on Retinoic Acid Receptor (RAR) family gene expression. T0901317 alone increase RARalpha gene expression in monocytes and the effects of the co treatment of the cells with T0901317 and a specific RARalpha agonist (AM580) wer...
ORGANISM(S): Homo sapiens 
2010-04-08 | E-GEOD-13407 | biostudies-arrayexpress
UnknownDifferential regulation of cysteine oxidative post-translational modifications in high and low aerobic capacity.
Not available
S-EPMC6289973 | biostudies-literature
UnknownComparison of Morphological and DNA-Based Identification Methods to Assess Earthworm (Clitellata: Lumbricidae) Diversity at 25 Permanent Soil Monitoring Sites in Germany.
Not available
S-EPMC11955243 | biostudies-literature
TranscriptomicsRibo-Seq of UPF1 depletion in human colorectal adenocarcinoma cell line HCT116 via the auxin-inducible degron (AID) system
UPF1 is a multi-domain RNA helicase that constantly monitors the transcriptome by non-specifically binding to mRNAs, dissociating from non-target transcripts, and initiating degradation on selected target RNAs via multiple proposed pathways such as nonsense-mediated decay (NMD). NMD is a translation...
ORGANISM(S): Homo sapiens 
2025-09-01 | E-MTAB-13837 | biostudies-arrayexpress
TranscriptomicsInitial Test-RNA-Seq of UPF1 depletion in human colorectal adenocarcinoma cell line HCT116 via the auxin-inducible degron (AID) system
UPF1 is a multi-domain RNA helicase that constantly monitors the transcriptome by non-specifically binding to mRNAs, dissociating from non-target transcripts, and initiating degradation on selected target RNAs via multiple proposed pathways such as nonsense-mediated decay (NMD). NMD is a translation...
ORGANISM(S): Homo sapiens 
2025-09-01 | E-MTAB-13839 | biostudies-arrayexpress
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