OmicsDI
Toggle navigation
Browse
Submit Data
Databases
API
Help
Advanced
Search
124672
Results
Show all
Save search
Copy query
Show results for
Unknown
(116468)
Genomics
(3002)
Proteomics
(2388)
Transcriptomics
(2371)
Metabolomics
(311)
Models
(75)
Genomic
(19)
Other
(14)
Clinical
(12)
Methylation profiling
(6)
Multiomics
(2)
Organisms
Homo sapiens
(1470)
Mus musculus
(815)
Arabidopsis thaliana
(108)
Rattus norvegicus
(84)
Drosophila melanogaster
(83)
Medicago truncatula
(36)
Zea mays
(29)
Oryza sativa
(27)
Saccharomyces cerevisiae
(21)
Sus scrofa
(21)
Escherichia coli
(17)
Danio rerio
(16)
Caenorhabditis elegans
(12)
Hordeum vulgare
(12)
Oryctolagus cuniculus
(10)
Canis lupus familiaris
(10)
Triticum aestivum
(10)
Candida albicans
(9)
Schizosaccharomyces pombe
(8)
Burkholderia cenocepacia
(8)
Bacillus cereus
(7)
Streptomyces coelicolor
(7)
Staphylococcus aureus
(7)
Rattus
(6)
Escherichia coli str. K-12 substr. MG1655
(6)
Ovis aries
(6)
Halobacterium salinarum
(5)
Arabidopsis
(3)
Cavia porcellus
(1)
Mammalia
(1)
Organisms
tidal flat metagenome
(865)
Mus musculus
(258)
Homo sapiens
(213)
Mesembryanthemum crystallinum
(154)
soil metagenome
(42)
Parthenium argentatum
(24)
Drosophila melanogaster
(21)
Kalanchoe fedtschenkoi
(18)
Oryza sativa
(18)
Brachypodium distachyon
(18)
Rattus norvegicus
(18)
Medicago truncatula
(17)
rhizosphere metagenome
(17)
Arabidopsis thaliana
(15)
Zea mays
(10)
Lotus japonicus
(8)
Solanum lycopersicum
(7)
Sus scrofa
(7)
Amycolatopsis sp. ATCC 39116
(6)
root associated fungus metagenome
(6)
fungal sp.
(6)
Triticum aestivum
(5)
Glycine max
(5)
Yucca gloriosa
(4)
root metagenome
(4)
fungus metagenome
(4)
Vitis vinifera
(4)
Bombyx mori
(4)
Danio rerio
(4)
Ovis aries
(4)
Repository
ENA
(2466)
biostudies-arrayexpress
(2260)
pride
(2057)
geo
(350)
EGA
(325)
MetaboLights
(282)
MassIVE
(131)
PeptideAtlas
(120)
BioModels
(72)
jPOST
(26)
GNPS
(24)
PanoramaPublic
(21)
dbGaP
(19)
PAXDB
(13)
iProX
(12)
GPMDB
(5)
MetabolomicsWorkbench
(5)
Cell Collective
(1)
EVA
(1)
FAIRDOMHub
(1)
PMR
(1)
Tissue
Cell culture
(399)
Epithelial cell
(147)
Brain
(116)
Kidney
(98)
Others
(85)
Blood plasma
(77)
Liver
(65)
Heart
(57)
Permanent cell line cell
(49)
Lung
(47)
Blood
(43)
Fibroblast
(43)
B cell
(39)
Leaf
(34)
T cell
(32)
Digestive System
(8)
Male Reproductive System
(8)
Female Reproductive System
(7)
Liver
(3)
Spleen
(3)
Muscle
(1)
Bacterial cells
(1)
Worms
(1)
Feces
(1)
Blood
(1)
Adrenal Gland
(1)
Brain
(1)
Kidney
(1)
Lung
(1)
Pancreas
(1)
Disease
Breast cancer
(38)
Alzheimer's disease
(17)
Parkinson's disease
(13)
Normal
(11)
Diabetes mellitus
(2)
Asthma
(2)
Control
(2)
Huntington's disease
(1)
Bacterial infectious disease
(1)
Heart disease
(1)
Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4
(1)
Multiple sclerosis
(1)
Diabetes mellitus type 1
(1)
Large cell neuroendocrine carcinoma
(1)
Rheumatoid Arthritis
(1)
Fish tuberculosis
(1)
Imatinib-resistant CML cell line subclone
(1)
Mild asthma
(1)
Sham surgery
(1)
Cirrhosis
(1)
Small cell lung carcinoma
(1)
Cystic fibrosis
(1)
Secondary myelofibrosis
(1)
Locally advanced rectal cancer
(1)
Chronic myeloid leukemia
(1)
Tumor
(1)
Chronic myelogenous leukemia
(1)
Acute promyelocytic leukemia
(1)
Prostate cancer
(1)
Lung cancer
(1)
Technology Type
Mass Spectrometry
(2062)
Shotgun proteomics
(1101)
Mass spectrometry
(216)
NMR spectroscopy
(34)
Mass spectrometry assay
(32)
Illumina HiSeq 2000
(13)
Illumina 15K
(8)
NMR spectroscopy assay
(7)
ESI
(5)
Illumina HiSeq 2500, ILLUMINA
(3)
Illumina Genome Analyzer II
(3)
ILLUMINA, Illumina HiSeq 2000
(2)
Illumina HiSeq 2000, ILLUMINA
(2)
NextSeq 500, Illumina HiSeq 2000, ILLUMINA, Illumina HiSeq 2500
(1)
Illumina HiSeq 2000 (ILLUMINA), Illumina HiSeq 1500 (ILLUMINA)
(1)
NextSeq 550, ILLUMINA
(1)
Illumina OncoArray
(1)
ILLUMINA, Illumina HiSeq 4000, Illumina HiSeq 2500
(1)
Illumina MiSeq, Illumina HiSeq 2500
(1)
Illumina HiSeq 2500, Illumina MiSeq
(1)
Illumina HiSeq 2000, Ion Torrent PGM
(1)
Illumina HiScanSQ, Illumina_Human660W-Quad_v1_A-Not supplied
(1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000
(1)
Affymetrix 6.0, Illumina Genome Analyzer II
(1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx
(1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0
(1)
Illumina HiSeq 2500
(1)
Illumina HiSeq 2500, Illumina HiSeq 2000
(1)
Illumina Genome Analyzer II, Illumina HiSeq 2000
(1)
EI
(1)
Instrument Platform
Illumina NovaSeq 6000
(58)
Illumina HiSeq 2000
(27)
Illumina HiSeq 4000
(26)
Illumina HiSeq 2500
(25)
NextSeq 500
(14)
Illumina Genome Analyzer IIx
(8)
NextSeq 2000
(7)
Illumina MiSeq
(6)
NextSeq 550
(6)
418 [Affymetrix]
(5)
Illumina Genome Analyzer II
(5)
Illumina Genome Analyzer
(3)
Affymetrix GeneChip Scanner 3000 7G
(2)
The Agilent scanner G2565BA
(2)
Agilent�s Microarray Hybridization Oven
(2)
NanoDrop ND-1000 Spectrophotometer (NanoDrop Technologies)
(2)
G2505A DNA microarray scanner [Agilent]
(2)
GenePix 4000B [Axon Instruments]
(2)
ScanArray 6000 [Perkin Elmer]
(2)
Illumina NovaSeq X
(2)
Agilent NGS Workstation
(2)
HiSeq X Ten
(2)
Illumina HiSeq 2000 platform
(1)
Cellranger
(1)
FACS BD Aria II & III
(1)
High-performance computing workstation
(1)
Protocol computer workstation running R statistical software
(1)
Thermal cycler (PCR); Covaris ME220 focused ultrasonicator; magnetic separation rack; Agilent TapeStation system (D5000 and D1000 ScreenTape assays); Qubit fluorometer or equivalent; microcentrifuge.
(1)
JANUS® G3 MDT automated liquid handling workstation (PerkinElmer); thermal cycler or incubator (42 °C); Zymo DNA Clean & Concentrator columns; AMPure XP magnetic bead purification system; magnetic separation rack.
(1)
Multichannel pipettes or automated liquid handler; 384-well tissue culture plates; Class II biological safety cabinet; CO₂ incubator (37 °C, 5% CO₂).
(1)
Publication Date
2013
(435)
2014
(413)
2023
(400)
2022
(382)
2025
(373)
2021
(342)
2024
(294)
2026
(285)
2010
(277)
2012
(275)
2015
(264)
2020
(252)
2011
(218)
2019
(204)
2016
(197)
2018
(166)
2017
(135)
2008
(121)
2009
(102)
2005
(88)
2007
(78)
2006
(30)
2004
(14)
2003
(2)
2002
(2)
UNIPROT ID/AC
Q13489
(2)
Q13490
(2)
Q04864
(2)
Q01201
(2)
P21580
(2)
Q12933
(2)
Q15628
(2)
Q13546
(2)
Q9XFM0
(2)
Q940U6
(2)
O15111
(2)
P25963
(2)
P19438
(2)
P01375
(2)
O43318
(2)
Q04206
(2)
Q00653
(2)
P19838
(2)
Q969J5
(1)
Q08334
(1)
P52294
(1)
Q9GZX6
(1)
Q8N6P7
(1)
Q8NB16
(1)
Q9Y572
(1)
P21583
(1)
Q9NQC7
(1)
Q9BYM8
(1)
Q9H0F6
(1)
Q96EP0
(1)
ENSEMBL ID
ENSG00000170477
(108)
ENSG00000229353
(44)
ENSG00000147251
(22)
ENSG00000247315
(10)
ENSG00000176092
(3)
ENSG00000204131
(3)
ENSG00000100906
(2)
ENSG00000118503
(2)
ENSG00000003402
(1)
ENSG00000171791
(1)
ENST00000333681.5
(1)
ENSSSCT00065044848.1
(1)
ENST00000371199.8
(1)
ENST00000612899.5
(1)
ENSG00000101966
(1)
ENST00000216797.10
(1)
CHEBI ID
CHEBI:26806
(26)
CHEBI:16551
(2)
CHEBI:15343
(2)
CHEBI:16108
(2)
CHEBI:17665
(2)
CHEBI:18021
(2)
CHEBI:15361
(2)
CHEBI:60425
(1)
CHEBI:26490
(1)
CHEBI:22194
(1)
CHEBI:25115
(1)
CHEBI:27232
(1)
CHEBI:30867
(1)
CHEBI:68689
(1)
CHEBI:78679
(1)
CHEBI:53071
(1)
CHEBI:77131
(1)
CHEBI:57768
(1)
CHEBI:57754
(1)
CHEBI:17464
(1)
CHEBI:32906
(1)
CHEBI:29590
(1)
CHEBI:64476
(1)
CHEBI:27949
(1)
CHEBI:29605
(1)
CHEBI:32902
(1)
CHEBI:30088
(1)
CHEBI:64475
(1)
CHEBI:15669
(1)
CHEBI:17530
(1)
Metabolite Name
Phenylalanine
(36)
Taurine
(36)
Creatine
(35)
Glycine
(34)
Valine
(33)
Glutamine
(32)
Alanine
(32)
Isoleucine
(32)
Leucine
(32)
Glucose
(31)
Hypoxanthine
(31)
Tyrosine
(30)
Threonine
(30)
Serine
(29)
Proline
(29)
Glucose
(29)
Uracil
(29)
Creatinine
(29)
Inosine
(29)
Succinate
(28)
Myo-inositol
(28)
Glutamine
(28)
Adenine
(28)
Uridine
(28)
Tryptophan
(27)
Lysine
(27)
Methionine
(27)
Choline
(27)
Alanine
(27)
Xanthine
(27)
First Public Date
2025
(1052)
2019
(201)
2024
(185)
2026
(163)
2014
(153)
2021
(130)
2023
(124)
2018
(115)
2022
(106)
2020
(99)
2017
(50)
2015
(32)
2016
(31)
2013
(25)
Modelling Approach
Ordinary differential equation model
(57)
Petri net
(6)
Constraint-based model
(4)
Study status
Completed
(6)
Recruiting
(2)
Not yet recruiting
(2)
Withdrawn
(1)
Active, not recruiting
(1)
Lab affiliation
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany
(32)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany Frankfurt Cancer Institute, Frankfurt am Main, Germany Cardio-Pulmonary Institute, Frankfurt am Main, Germany
(14)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA
(10)
King's College London
(9)
School of Life Sciences, University of Warwick
(9)
Imperial College London
(8)
Pacific Northwest National Laboratory
(8)
University of Warwick
(8)
Centre for Applied Pharmacokinetic Research, School of Health Sciences, The University of Manchester, UK
(7)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720
(7)
Department of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol, United Kingdom
(6)
Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Goethe University Frankfurt am Main, Germany
(6)
Institute for Systems Biology
(6)
University Hospital Cologne
(6)
Buchmann Institute of Molecular Life Sciences and Institute of Biophysical Chemistry, Goethe University, Frankfurt am Main, Germany
(5)
Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, United States
(5)
Experimental Neurology, University Hospital, Frankfurt am Main, Germany
(5)
Institute for Vascular Signalling, Centre for Molecular Medicine, Goethe University, Frankfurt am Main, Germany.
(5)
Research Group Mitochondrial Disorders, Institute of Human Genetics, Technische Universität München, München, Germany
(5)
Aarhus University Department of Biomedicine DK-8000 Aarhus C
(4)
Department of Biology, Institute of Microbiology, ETH Zürich, Switzerland
(4)
Director, Institute of Biochemistry II Goethe University Medical Faculty University Hospital Building 75 Theodor-Stern-Kai 7 60590 Frankfurt am Main Germany
(4)
Division of Cardiovascular Sciences, School of Medical Science, Faculty of Biology, Medicine and Health, The University of Manchester
(4)
Functional Proteomics, ICR
(4)
Head of the Curie Institute Mass Spectrometry Platform
(4)
Institut für Kardiovaskuläre Physiologie, Goethe-Universität, Frankfurt am Main, Germany
(4)
Institute of Biochemistry II, Faculty of Medicine, Goethe University Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany.
(4)
Institute of Molecular Biology (IMB)
(4)
Proteomics
(4)
Proteomics and Signal Transduction Max Planck Institute of Biochemistry Am Klopferspitz 18 D-82152 Martinsried
(4)
Tags
pathogen
(10)
xref:PubMed:39747144
(9)
pathogen:bacterium
(9)
xref:PubMed:22253761
(7)
xref:PubMed:34991658
(6)
xref:PubMed:21503142
(6)
xref:PubMed:42099614
(5)
xref:PubMed:34764283
(5)
xref:PubMed:39271940
(5)
xref:PubMed:39300486
(4)
xref:PubMed:36824462
(4)
xref:PubMed:29067999
(4)
xref:PubMed:42258536
(4)
xref:PubMed:41361170
(4)
xref:PubMed:41408486
(3)
xref:PubMed:42484372
(3)
xref:PubMed:33951416
(3)
xref:PubMed:39358361
(3)
xref:PubMed:39070650
(3)
xref:PubMed:38359551
(3)
xref:PubMed:35325193
(3)
xref:PubMed:27301858
(3)
xref:PubMed:39680663
(3)
xref:PubMed:34473646
(3)
xref:PubMed:31278070
(3)
xref:PubMed:25176150
(3)
xref:PubMed:17419842
(3)
xref:PubMed:32732898
(3)
xref:PubMed:26597293
(3)
xref:PubMed:22652128
(3)
Keyword
Advanced and/or metastatic colorectal cancer
(1)
Electronic Health Records
(1)
Diagnostic Delay
(1)
Triggers
(1)
Fluticasone
(1)
Xhance
(1)
OPTINOSE FLUTICASONE
(1)
General practitioner
(1)
Participation
(1)
Organized screening
(1)
Screening
(1)
Capecitabine
(1)
Bevacizumab
(1)
Oxaliplatin
(1)
IsPrivate
False
(72)
Model Flag
Non Kinetic
(14)
Submitter Keywords
Immuno-oncology
(1)
Classification
bacteria
(9)
fungi
(1)
Modification
Not available
(16)
15.994915
(6)
57.021464
(5)
42.010565
(3)
79.966331
(3)
N6
(3)
6-dioxaoctanediamine derivatized cysteine
(2)
N6-dimethyl-L-lysine
(2)
-17.026549
(1)
0.984016
(1)
144.102062
(1)
229.162932
(1)
28.0313
(1)
2x(15)N labeled L-lysine
(1)
42.04695
(1)
4x(15)N labeled L-arginine
(1)
4x(2)H labeled dimethylated L-lysine
(1)
4x(2)H labeled dimethylated residue
(1)
56.026215
(1)
59.036279
(1)
71.037114
(1)
Study type
Transcription profiling by array
(1360)
RNA-seq of coding RNA
(292)
ChIP-seq
(145)
Comparative genomic hybridization by array
(101)
Unknown experiment type
(72)
Methylation profiling by array
(48)
RNA-seq of non coding RNA
(36)
ChIP-chip by tiling array
(30)
RNA-seq of coding RNA from single cells
(29)
Other
(21)
Methylation profiling by high throughput sequencing
(18)
Genotyping by array
(12)
Transcription profiling by tiling array
(9)
MicroRNA profiling by array
(8)
DNA-seq
(7)
Transcription profiling by RT-PCR
(6)
Transcription profiling by SAGE
(5)
High-throughput sequencing
(5)
ChIP-chip by array
(5)
RNA-seq of total RNA
(5)
Plant - High-throughput sequencing
(4)
Animal - One-color microarray
(3)
RNAi profiling by array
(3)
Hi-C
(3)
Proteomic profiling by array
(3)
Cell line - One-color microarray
(2)
Animal - High-throughput sequencing
(2)
CLIP-seq
(2)
Bisulfite-seq
(2)
ScATAC-seq
(2)
Release Date
2022
(13394)
2021
(12150)
2023
(11938)
2025
(11202)
2024
(10056)
2020
(9732)
2019
(7737)
2018
(6778)
2017
(5658)
2016
(5327)
2015
(4735)
2014
(4036)
2013
(2884)
2012
(2608)
2011
(2126)
2010
(1839)
2026
(1582)
2009
(1381)
2008
(1019)
2007
(632)
2006
(495)
2005
(376)
2004
(247)
2003
(198)
2002
(172)
2001
(127)
2000
(105)
1998
(80)
1999
(78)
1997
(25)
Location
India
(2)
Australia
(2)
United States
(2)
Thailand
(1)
European Union
(1)
South Africa
(1)
Iran
(1)
Ukraine
(1)
United Kingdom
(1)
South Korea
(1)
Japan
(1)
Czechia
(1)
Canada
(1)
France
(1)
Previous
page
1 / 12468
You're on page
1
page
2
page
3
page
4
page
5
page
...
page
12468
Next
page
Sort
by:
Relevance
Page size
10
Staphylococcus sp. aM strain:aM
Staphylococcus sp. aM strain:aM Genome sequencing
PRJNA949866
|
ENA
Cite
Sphingobium sp. AM strain:AM
Sphingobium sp. AM strain:AM Genome sequencing and assembly
PRJNA305642
|
ENA
Cite
Streptacidiphilus rugosus AM-16
Streptacidiphilus rugosus AM-16 genome sequencing
PRJNA62489
|
ENA
Cite
Sulfurospirillum sp. Am-N
Sulfurospirillum sp. Am-N genome sequencing project.
PRJNA46505
|
ENA
Cite
Acinetobacter sp. AM
Acinetobacter sp. AM Genome sequencing and assembly
PRJNA450620
|
ENA
Cite
Lactiplantibacillus plantarum strain:AM
Lactiplantibacillus plantarum strain:AM Genome sequencing
PRJNA1184968
|
ENA
Cite
Bacillus sp. AM 13(2015) strain:AM 13
Bacillus sp. AM 13(2015) strain:AM 13 Genome sequencing and assembly
PRJNA295799
|
ENA
Cite
Streptacidiphilus rugosus AM-16
Streptacidiphilus rugosus AM-16 Genome sequencing and assembly
PRJNA234778
|
ENA
Cite
Geobacter sulfurreducens strain:AM-1
Geobacter sulfurreducens AM-1 genome sequencing
PRJNA270810
|
ENA
Cite
Vibrio cholerae AM-19226
O39 serogroup strain
PRJNA17723
|
ENA
Cite
Previous
page
1 / 12468
You're on page
1
page
2
page
3
page
4
page
5
page
...
page
12468
Next
page
Sort
by:
Relevance
Page size
10
OmicsDI
is part of the ELIXIR infrastructure
OmicsDI is an Elixir interoperability service.
Learn more ›
Tweets
