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TranscriptomicsArray-based DNA-methylation profiling of fetal tissues obtained by routine invasive prenatal testing (chorionic and amniotic samples)
Genome wide DNA methylation profiling of fetal DNA-methylation levels in 47 chorionic villi (CVS) and 16 amniotic cell (AC) samples. The Illumina Infinium 27k Human DNA methylation Beadchip was used to determine DNA methylation profiles across approximately 27,578 CpGs in fetal samples. Bisulphite c...
ORGANISM(S): Homo sapiens 
2012-12-14 | E-GEOD-35327 | biostudies-arrayexpress
TranscriptomicsDNA methylation analysis in non-alcoholic fatty liver disease suggests distinct disease-specific and remodeling signatures after bariatric surgery
Non-alcoholic fatty liver disease (NAFLD) is the most common chronic liver disorder in industrialized countries. Liver samples from morbidly obese patients with all stages of NAFLD and controls were analysed by array-based DNA methylation and mRNA expression profiling. Bisulphite converted DNA from ...
ORGANISM(S): Homo sapiens 
2013-08-08 | E-GEOD-48325 | biostudies-arrayexpress
TranscriptomicsA familial disorder of altered DNA-methylation
In a subset of imprinting disorders caused by epimutations, multiple imprinted loci are affected. We have investigated the clinical and molecular features of a familial DNA methylation disorder. Bisulphite converted DNA from the 60 samples were hybridised to the Illumina Infinium 27k Human Methylati...
ORGANISM(S): Homo sapiens 
2014-07-01 | E-GEOD-47879 | biostudies-arrayexpress
TranscriptomicsThe tissue is the issue: Improved methylome analysis from paraffin-embedded tissues by application of the HOPE-technique
Genome wide DNA methylation profiling of DNA samples obtained from normal lung tissue and lung carcinoma, either fixed by formalin (FFPE), HOPE (paraffin embedded) or cryo-preserved. Illumina's HumanMethylation450 BeadChip was used to obtain DNA methylation profiles across approximately 450.000 CpG...
ORGANISM(S): Homo sapiens 
2016-08-22 | E-GEOD-51077 | biostudies-arrayexpress
TranscriptomicsHuman muscle Illumina Inf 450 DNA methylation data
Genome wide DNA methylation profiles of human muscle tissue. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 485,000 CpGs. Dataset includes 26 samples from Germany. The goal of the study was to evalute the relationship b...
ORGANISM(S): Homo sapiens 
2014-11-03 | E-GEOD-61259 | biostudies-arrayexpress
TranscriptomicsHuman adipose Illumina Inf 450 DNA methylation data
Genome wide DNA methylation profiles of human adipose tissue. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 485,000 CpGs. Dataset includes 32 samples from Germany. The goal of the study was to evalute the relationship ...
ORGANISM(S): Homo sapiens 
2014-11-03 | E-GEOD-61257 | biostudies-arrayexpress
TranscriptomicsHuman Liver Illumina Inf 450 DNA methylation data
Genome wide DNA methylation profiles of human Liver tissue. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 485,000 CpGs. Dataset includes 79 samples from Germany. The goal of the study was to evalute the relationship be...
ORGANISM(S): Homo sapiens 
2014-11-03 | E-GEOD-61258 | biostudies-arrayexpress
TranscriptomicsArray-based DNA methylation profiling in male infertility reveals allele-specific DNA methylation in PIWIL1 and PIWIL2
Array-based DNA methylation profiling in peripheral blood leukocytes of 30 infertile men with impaired spermatogenesis as compared to 10 fertile men using the Illumina Infinium HumanMethylation 450k Bead Chip reveald 471 CpG sites (287 genes) to be differentially methylated between both groups. Thes...
ORGANISM(S): Homo sapiens 
2014-02-16 | E-GEOD-51245 | biostudies-arrayexpress
GenomicsMcGill EMC Community projects Release 7 for cell line "SaOS-2" - samples
Complete reference epigenome (as defined by IHEC) of a SaOS-2 cell line with osteosarcoma.
EGAD00001007678 | EGA
GenomicsMCGILL_R4.H3K9ME3 - samples
McGill EMC Release 4 for assay "H3K9me3"
EGAD00001001299 | EGA
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