Ammonia oxidising bacteria

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Unknown (34)
Genomics (15)
Metabolomics (2)
Transcriptomics (1)
Proteomics (1)

Organisms

marine sediment metagenome (1)
uncultured Nitrosomonas sp. B7 (1)

Organisms

Nitrosoarchaeum haohaiensis (1)
biogas fermenter metagenome (1)

Repository

ENA (15)
MetaboLights (2)
biostudies-arrayexpress (1)
pride (1)

Technology Type

Mass spectrometry (1)
Mass spectrometry assay (1)
Mass Spectrometry (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating – hilic (1)

Publication Date

2013 (1)
2026 (1)
2024 (1)
2023 (1)

CHEBI ID

CHEBI:17750 (2)
CHEBI:41321 (2)
CHEBI:7274 (2)
CHEBI:10020 (1)
CHEBI:1013 (1)
CHEBI:1017 (1)
CHEBI:10242 (1)
CHEBI:1027 (1)
CHEBI:10284 (1)
CHEBI:1030 (1)
CHEBI:10317 (1)
CHEBI:10366 (1)
CHEBI:10373 (1)
CHEBI:104011 (1)
CHEBI:10482 (1)
CHEBI:10539 (1)
CHEBI:10558 (1)
CHEBI:10569 (1)
CHEBI:1058 (1)
CHEBI:10598 (1)
CHEBI:10646 (1)
CHEBI:10647 (1)
CHEBI:10648 (1)
CHEBI:1069 (1)
CHEBI:10719 (1)
CHEBI:10721 (1)
CHEBI:10790 (1)
CHEBI:10860 (1)
CHEBI:1094 (1)
CHEBI:1113 (1)

Metabolite Name

Choline phosphate (2)
Creatine (2)
Creatinine (2)
Guanidinoacetate (2)
Hypoxanthine (2)
Methylimidazole acetaldehyde (2)
N6-Acetyl-L-lysine (2)
Phosphocreatine (2)
Piperidine (2)
Taurine (2)
(+)-gamma-Hydroxy-L-homoarginine (1)
(-)-3-Cyanomethyl-3-hydroxy-1H-indol-2(3H)-one (1)
(-)-Camphor (1)
(-)-Jasmonic acid (1)
(-)-erythro-(2R,3R)-dihydroxybutylamide (1)
(24R,24'R)-Fucosterol epoxide (1)
(25S)-11alpha,20,26-trihydroxyecdysone (1)
(2S,3S)-2-Hydroxytridecane-1,2,3-tricarboxylate (1)
(3Z)-Phytochromobilin (1)
(5-L-Glutamyl)-L-glutamine (1)
(E)-3,7-Dimethylocta-1,6-diene-3,8-diol (1)
(E)-Glutaconate (1)
(R)-2,3-Dihydroxy-3-methylpentanoate (1)
(R)-2-Hydroxyglutarate (1)
(R)-3-Amino-2-methylpropanoate (1)
(R)-3-Hydroxybutanoate (1)
(R)-4'-Phosphopantothenoyl-L-cysteine (1)
(S)-1-Pyrroline-5-carboxylate (1)
(S)-2-Acetolactate (1)
(S)-3-Hydroxyisobutyrate (1)

First Public Date

2020 (4)
2018 (4)
2025 (3)
2016 (2)
2024 (1)
2021 (1)

Study type

Other (1)

Release Date

2024 (5)
2015 (4)
2023 (3)
2021 (3)
2018 (3)
2016 (3)
2025 (2)
2022 (2)
2019 (2)
2017 (2)
2014 (2)
2013 (1)
2026 (1)
2020 (1)
2011 (1)

Lab affiliation

Advanced Water Management Centre, University of Queensland. (1)

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Mechanism of persistence of the ammonia oxidising bacteria - Nitrosomonas to the the biocide Free Nitrous Acid (FNA)

This study shows the molecular mechanism by which the ammonia oxidising bacteria- Nitrosomonas is able to persist in high concentrations of FNA.

ORGANISM(S): uncultured Nitrosomonas sp. B7

2023-06-02 | PXD007514 | Pride

Multi-Species Communities Containing Ammonia-Oxidising Bacteria

Multi-Species Communities Containing Ammonia-Oxidising Bacteria 16S metabarcoding raw sequence reads

PRJNA552789 | ENA

AOB Study

Ammonia oxidising Bacteria

PRJEB12676 | ENA

Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms.

Not available

S-EPMC3131854 | biostudies-literature

Biofilm formation inhibition and dispersal of multi-species communities containing ammonia-oxidising bacteria.

Not available

S-EPMC6711990 | biostudies-literature

Bacteria are the dominant ammonia oxidizers in coastal sediments of the Western English Channel

The abundance of bacterial (AOB) and archaeal (AOA) ammonia oxidisers, assessed using quantitative PCR measurements of their respective a-subunit of the ammonia monooxygenase (amoA) genes, and ammonia oxidation rates were measured in four contrasting coastal sediments in the Western English Channel....

ORGANISM(S): marine sediment metagenome

2013-08-24 | E-GEOD-50163 | biostudies-arrayexpress

AOB FISH sequencing

Sequencing of Ammonia oxidising bacteria from FISH enriched samples

PRJEB15256 | ENA

Small-scale variation of ammonia oxidisers within intertidal sediments dominated by ammonia-oxidising bacteria Nitrosomonas sp. amoA genes and transcripts.

Not available

S-EPMC5643298 | biostudies-literature

Ammonia-oxidising bacteria not archaea dominate nitrification activity in semi-arid agricultural soil.

Not available

S-EPMC4459192 | biostudies-literature

Marine ammonia-oxidising archaea and bacteria occupy distinct iron and copper niches