An Yong Y - OmicsDI

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Unknown (1175)
Proteomics (179)
Transcriptomics (108)
Genomics (28)
Metabolomics (15)
Multiomics (13)
Models (2)
Other (1)

Organisms

Homo sapiens (107)
Mus musculus (48)
Arabidopsis thaliana (8)
Rattus norvegicus (4)
cellular organisms (3)
Pseudomonas aeruginosa PAO1 (3)
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 (2)
Glycine soja (2)
Gallus gallus (2)
Aspergillus oryzae (2)
Escherichia coli (2)
Iridovirus (1)
Epinephelus coioides (1)
Rhodococcus opacus (1)
Lactobacillus acidophilus NCFM (1)
Bemisia tabaci (1)
Bombyx mori (1)
Yellow fever virus (1)
Escherichia coli O157:H7 str. EDL933 (1)
unidentified (1)
Xenopus laevis (1)
Oryza sativa Indica Group (1)
Zea mays (1)
Oryza sativa (1)
Vitis vinifera (1)
Bacillus subtilis (1)
Bos taurus (1)
Pseudomonas putida KT2440 (1)
Oryza sativa Japonica Group (1)
Danio rerio (1)

Repository

biostudies-arrayexpress (119)
iProX (68)
pride (63)
EGA (20)
PAXDB (19)
MetaboLights (14)
PeptideAtlas (14)
MassIVE (9)
jPOST (3)
BioModels (2)
GNPS (1)
GPMDB (1)

Tissue

Cell culture (24)
Others (11)
Blood plasma (4)
Epithelial cell (4)
Macrophage (4)
Plasma Non-glyco (3)
Blood serum (3)
Brain (3)
Plant cell (3)
Smooth muscle cell (3)
Blood cell (2)
Bone marrow (2)
Colonic mucosa (2)
Hepatocyte (2)
Leaf (2)
Liver (2)
Permanent cell line cell (2)
Root (2)
Blood (1)
Bone tissue (1)
Colon epithelial cell (1)
Kidney (1)
Malignant cell (1)
Placenta (1)
Primary cell (1)
Stomach (1)
Testis (1)
Type B pancreatic cell (1)
Urine (1)
Whole body (1)

Disease

Osteosarcoma (5)
Disease free (2)
Chronic myelogenous leukemia (1)
Not Available (1)
Adult hepatocellular carcinoma (1)
Brain glioblastoma multiforme (1)
Breast cancer (1)
Colon cancer (1)
Cutaneous malignant melanoma 1 (1)
Cystic fibrosis (1)
Lung cancer (1)
Systemic lupus erythematosus (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (63)
Shotgun proteomics (38)
Mass spectrometry (13)
Gel-based experiment (9)
Bottom-up proteomics (6)
Data-dependent acquisition (5)
Affinity purification coupled with mass spectrometry proteomics (4)
SWATH MS (2)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Data-independent acquisition (1)

Instrument Platform

LTQ Orbitrap Velos (14)
Q Exactive (9)
Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - positive - reverse phase (6)
LTQ Velos (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina HiSeq 1500 (1)
MicrOTOF II (1)
Instrument (1)
LTQ Orbitrap XL (1)
LTQ XL (1)
Orbitrap Fusion (1)
Q Exactive HF (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Varian (1)
Bruker (1)
Liquid Chromatography MS - (1)
Gas Chromatography MS - (1)

Publication Date

2015 (31)
2025 (28)
2012 (27)
2022 (27)
2024 (25)
2023 (22)
2010 (22)
2021 (21)
2013 (15)
2014 (14)
2011 (12)
2005 (11)
2009 (9)
2020 (9)
2019 (8)
2016 (7)
2026 (7)
2006 (4)
2008 (3)
2018 (3)
2017 (3)
2007 (2)

UNIPROT ID/AC

9544.ENSMMUP00000000740 (19)
9544.ENSMMUP00000001377 (19)
9544.ENSMMUP00000001769 (19)
9544.ENSMMUP00000001915 (19)
9544.ENSMMUP00000002527 (19)
9544.ENSMMUP00000002781 (19)
9544.ENSMMUP00000003585 (19)
9544.ENSMMUP00000003611 (19)
9544.ENSMMUP00000004046 (19)
P17676 (2)
P15260 (2)
P67775 (2)
O60674 (2)
P01112 (2)
P05231 (2)
P08887 (2)
P40763 (2)
P40189 (2)
P01579 (2)
P23458 (2)
P62136 (2)
O15524 (2)
O14543 (2)
P42224 (2)
Q06124 (2)
Q07889 (2)
P28482 (2)
Q02750 (2)
P04049 (2)
P62993 (2)

ENSEMBL ID

ENSG00000170477 (7)
ENSG00000229353 (3)
ENSG00000147251 (1)

CHEBI ID

CHEBI:30769 (7)
CHEBI:15354 (6)
CHEBI:15428 (6)
CHEBI:16449 (6)
CHEBI:25017 (6)
CHEBI:27266 (5)
CHEBI:17268 (5)
CHEBI:16914 (5)
CHEBI:18132 (5)
CHEBI:17234 (5)
CHEBI:15891 (5)
CHEBI:32816 (4)
CHEBI:17895 (4)
CHEBI:22653 (4)
CHEBI:16040 (4)
CHEBI:16811 (4)
CHEBI:16411 (4)
CHEBI:17562 (4)
CHEBI:7916 (4)
CHEBI:17750 (4)
CHEBI:24813 (4)
CHEBI:27897 (4)
CHEBI:17126 (4)
CHEBI:16235 (4)
CHEBI:16919 (4)
CHEBI:16335 (4)
CHEBI:28300 (4)
CHEBI:17822 (4)
CHEBI:26271 (4)
CHEBI:18012 (4)

Metabolite Name

N-acetylmethionine (3)
N-acetylproline (3)
Proline (3)
Methionine (3)
Leucine (3)
Guanine (3)
Glutamate (3)
Alanine (3)
Valine (3)
N6-methyladenosine (3)
Cholic acid (3)
Bilirubin (3)
Uric acid (3)
Linoleic acid (3)
4-hydroxybenzoate (3)
Epitestosterone glucuronide (2)
Isorhapontigenin (2)
Glycerophospho-N-palmitoyl ethanolamine (2)
3-methoxytyrosine (2)
Vanillate (2)
Valine betaine (2)
Urea (2)
Trans-4-hydroxyproline (2)
Thioproline (2)
Serotonin (2)
Phenylacetylglycine (2)
Phenylacetylglutamine (2)
Phenol sulfate (2)
Pantothenate (2)
N6-succinyladenosine (2)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (2)

Modification

Not available (1)

Study type

Transcription profiling by array (77)
RNA-seq of coding RNA (12)
ChIP-seq (7)
Methylation profiling by array (4)
RNA-seq of non coding RNA (4)
ChIP-chip by tiling array (3)
Proteomic profiling by array (3)
Transcription profiling by SAGE (2)
Unknown experiment type (2)
Other (2)
RNAi profiling by array (1)
Genotyping by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (159)
2023 (146)
2024 (144)
2025 (133)
2021 (118)
2020 (97)
2019 (62)
2018 (62)
2014 (58)
2016 (49)
2017 (49)
2015 (47)
2013 (31)
2010 (31)
2012 (25)
2011 (24)
2026 (24)
2009 (12)
2005 (11)
2006 (4)
2008 (3)
2007 (3)
2004 (2)

Lab affiliation

West China Hospital, Sichuan University (5)
Medical Basic Research Innovation Center for Cardiovascular and Cerebrovascular Diseases, Ministry of Education, Nanjing Medical University, Nanjing, Jiangsu, China (3)
Cancer Science Institute of Singapore (CSI), National University of Singapore (NUS) (2)
Department of Biochemistry and Molecular Biology, Oklahoma Center for Respiratory and Infectious Diseases, Oklahoma State University, Stillwater, Oklahoma, USA (2)
Shenzhen People’s Hospital (2)
USDA-ARS (2)
West China Hospital,Sichuan University (2)
college of pharmacy, Nankai university,Tianjin, 300353, China (2)
1. Nephrology Department of Guilin No. 924 Hospital, Guangxi Key laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research, 541002, Guilin, Guangxi, People’s Republic of China. 2. Clinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), 518020, Shenzhen, Guangdong, People’s Republic of China. (1)
Advanced Mass Spectrometry Center, Research Core Facility, Frontiers Scienc Center for Disease-Related Molecular Network, West China Hospital (1)
Cancer Science Institute of Singapore (CSI), National University of Singapore (NUS (1)
Cancer Science Institute of Singapore, National University of Singapore (1)
Cancer Science Institute, National University of Singapore, Singapore (1)
Center of Growth, Metabolism and Aging, Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, China (1)
Clinical Medical Research Center of Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, No.1017, Dongmen North Road, Luohu District, Shenzhen 518020, China. (1)
College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China (1)
College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi 712100, P.R. China (1)
Department of Biochemistry and Molecular Biology Oklahoma State University Stillwater, OK 74078 USA (1)
Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul 03722, Korea (1)
Department of Life Science, Pohang University of Science and Technology, Pohang, Gyeongbuk, Korea Department of Integrative Biosciences & Biotechnology, Pohang, Gyeongbuk, Republic of Korea (1)
Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Republic of Korea (South Korea) (1)
Department of Life Sciences, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea (1)
Department of Microbiology and Immunology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore (1)
Department of Oncology, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada (1)
Department of Orthopedic Surgery, Shanghai Jiao Tong University Affiliated Sixth People’s Hospital (1)
Department of Pharmacology and Chemical Biology, Emory University, USA (1)
Facility - Proteomics & Metabolomics (1)
Gladstone Institutes (1)
Hotchkiss Brain Institute and Department of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada Departments of Biochemistry and Molecular Biology, and Physiology and Pharmacology, and McCaig Institute for Bone and Joint Health, University of Calgary, Calgary, Canada (1)
IMB, Ackermannweg 4, 55128 Mainz (1)

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Short-term changes in the serum metabolome after laparoscopic sleeve gastrectomy and Roux-en-Y gastric bypass

INTRODUCTION: Bariatric surgery is known to be the most effective treatment for weight loss in obese patients and for the rapid remission of obesity-related comorbidities. These short-term improvements result from not only limited digestion or absorption but also dynamic changes ...

2022-03-17 | MTBLS2472 | MetaboLights

Therapeutic Effects of Modified Si-Miao-Yong-An Decoction in the Treatment of Rat Myocardial Ischemia/Reperfusion Injury.

Not available

S-EPMC9192308 | biostudies-literature

Expression data from 17 day old testes of wild type and UBR2-/- mice

Ubiquitylation of histones provides an important mechanism regulating chromatin remodeling and gene expression. Recent studies have revealed ubiquitin ligases involved in histone ubiquitylation, yet the responsible enzymes and the function of histone ubiquitination in spermatogenesis remain unclear....

ORGANISM(S): Mus musculus

2010-03-03 | E-GEOD-18824 | biostudies-arrayexpress

Jia-Wei-Si-Miao-Yong-An decoction modulates intestinal flora and metabolites in acute coronary syndrome model.

Not available

S-EPMC9845626 | biostudies-literature

Shifts in the pelagic ammonia-oxidizing microbial communities along the eutrophic estuary of Yong River in Ningbo City, China.

Not available

S-EPMC4621301 | biostudies-literature

Network pharmacology-based approach to research the effect and mechanism of Si-Miao-Yong-An decoction against thromboangiitis obliterans.

Not available

S-EPMC10274521 | biostudies-literature

Effects of Si-Miao-Yong-An decoction on myocardial I/R rats by regulating gut microbiota to inhibit LPS-induced TLR4/NF-κB signaling pathway.

Not available

S-EPMC10236840 | biostudies-literature

Clinical benefits of PD-1/PD-L1 inhibitors in patients with metastatic colorectal cancer: a systematic review and meta-analysis.

Not available

S-EPMC8944161 | biostudies-literature

Based on the Metabolomic Approach the Energy Metabolism Responses of Oriental River Prawn Macrobrachium nipponense Hepatopancreas to Acute Hypoxia and Reoxygenation

Hypoxia represents a major physiological challenge for prawns and is a problem in aquaculture. Therefore, an understanding of the metabolic response mechanism of economically important prawn species to hypoxia and re-oxygenation is essential. However, little is known about the intrinsic mechanisms b...

2021-05-17 | MTBLS584 | MetaboLights

Glyco-CPLL: an integrated method for in-depth and comprehensive N-glycoproteome profiling of human plasma

N-glycoproteins are involved in various biological processes. Certain distinctive glycoforms on specific glycoproteins enhance the specificity and/or sensitivity of cancer diagnosis. Therefore, the characterization of plasma N-glycoproteome is essential for new biomarker discovery. Absence of suitab...

ORGANISM(S): Homo sapiens (Human)

2020-01-09 | PXD016428 | Pride

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1508 Results

Show results for

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

IsPrivate

Modelling Approach

Modification

Study type

Release Date

Lab affiliation

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