Anti-cd3 - OmicsDI

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Unknown (1863)
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Organisms

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viral metagenome (1)
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Repository

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pride (81)
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Tissue

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Disease

Disease free (3)
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Acute leukemia (1)

Technology Type

Mass Spectrometry (83)
Shotgun proteomics (53)
Affinity purification coupled with mass spectrometry proteomics (18)
Bottom-up proteomics (8)
SWATH MS (5)
Mass spectrometry (4)
Data-dependent acquisition (4)
Top-down proteomics (3)
ESI (2)
Gel-based experiment (2)
Data-independent acquisition (1)
SRM/MRM (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (41)
Illumina HiSeq 2500 (14)
Illumina HiSeq 2000 (12)
NextSeq 500 (9)
Illumina HiSeq 4000 (8)
NextSeq 2000 (4)
NextSeq 550 (3)
Agilent G2565AA and G2565BA Microarray Scanner (2)
10x Genomics Chromium Controller (2)
Illumina MiSeq (2)
Illumina HiSeq 1500 (2)
Performed by Novogene; Illumina library preparation instrumentation (provider standard) (1)
Chromatin IP kit (1)
Immunomagnetic separation system (e.g., Miltenyi MACS separator), Tissue culture facilities (biosafety cabinet, CO₂ incubator) , Bench centrifuge (1)
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Agilent G2505C (1)
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Gene Titan (1)
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Agilent Surescan High Resolution DNA Microarray Scanner (1)

Publication Date

2021 (100)
2015 (89)
2013 (89)
2014 (76)
2025 (70)
2016 (63)
2012 (61)
2010 (59)
2023 (56)
2022 (56)
2026 (49)
2011 (43)
2019 (41)
2024 (39)
2020 (37)
2008 (32)
2018 (31)
2009 (29)
2017 (28)
2007 (9)
2005 (6)
2004 (2)

CHEBI ID

CHEBI:132559 (2)
CHEBI:71176 (2)
CHEBI:13332 (2)
CHEBI:24309 (2)
CHEBI:67057 (2)
CHEBI:30314 (2)
CHEBI:88714 (2)
CHEBI:72387 (2)
CHEBI:172914 (2)
CHEBI:20056 (2)
CHEBI:27082 (2)
CHEBI:171809 (2)
CHEBI:35465 (2)
CHEBI:2003 (2)
CHEBI:89698 (2)
CHEBI:66331 (2)
CHEBI:15628 (2)
CHEBI:89310 (2)
CHEBI:89843 (2)
CHEBI:74879 (2)
CHEBI:138785 (2)
CHEBI:25351 (2)
CHEBI:27404 (2)
CHEBI:2877 (2)
CHEBI:6052 (2)
CHEBI:24848 (2)
CHEBI:18148 (2)
CHEBI:30860 (2)
CHEBI:28846 (2)
CHEBI:28997 (2)

Metabolite Name

Palmitoyl ethanolamide (2)
PC(16:0/16:0) (2)
Cytarabine (2)
Phosphocholine (2)
L-Histidine (2)
Choline (2)
Cytosine (2)
L-Pyroglutamic acid (2)
Creatine (2)
Stearamide (2)
L-Phenylalanine (2)
Hypoxanthine (2)
Thr-Pro-Arg (1)
Thr-Gly-Arg (1)
Ser-Asp-Arg (1)
Pyroglu-Asn-Arg (1)
L-valine, n-[[1-(5-fluoropentyl)-1h-indol-3-yl]carbonyl]-, methyl ester (1)
Cys-His-Arg (1)
5-methoxy-4-methyl-3-phenylcoumarin (1)
4-phenylbutan-2-ol (1)
3-quinolinecarboxamide, 1,4-dihydro-8-methoxy-4-oxo-1-pentyl-n-tricyclo[3.3.1.13,7]dec-1-yl- (1)
2-methyl-6(s)-(3-pyridyl)tetrahydro-1,2-oxazine (1)
2-furancarboxylic acid, 5-[3-[4-[2-(4-fluorophenyl)ethoxy]phenyl]propyl]- (1)
1h-indole-3-carboxylic acid, 1-(5-fluoropentyl)-, 8-quinolinyl ester (1)
[1,1':4',1''-terphenyl]-3,4'',5-triol (1)
[[4-[5r-chloro-2z-[3r-cyclohexyl-3s-hydroxy-1r-propenyl]-3s-hydroxycyclopentyl]-2r-butenyl]oxy]-acetic acid, isopropyl ester (1)
(s)-n-(1-amino-1-oxo-3-phenylpropan-2-yl)-1-pentyl-1h-indole-3-carboxamide (1)
(3as,5r,5as,8as,9ar)-5,8a-dimethyl-1-methylidene-3a,4,5,5a,6,7,9,9a-octahydroazuleno[6,7-b]furan-2,8-dione (1)
L-myo-inositol-1,4,5-triphosphate (1)
Arg-asp (1)

First Public Date

2025 (146)
2024 (142)
2014 (130)
2023 (110)
2022 (92)
2021 (89)
2026 (85)
2020 (60)
2019 (59)
2017 (42)
2018 (37)
2015 (28)
2016 (23)
2013 (7)

Classification

bacteria (1)

Modification

15.994915 (1)
57.021464 (1)

Study status

Ongoing (1)
Withdrawn (1)
Not provided (1)
Recruiting (1)
Completed (1)

Study type

Transcription profiling by array (349)
RNA-seq of coding RNA (75)
ChIP-seq (54)
RNA-seq of coding RNA from single cells (34)
Methylation profiling by array (11)
Comparative genomic hybridization by array (8)
RNA-seq of total RNA (7)
Other (5)
Unknown experiment type (3)
ChIP-chip by array (3)
ATAC-seq (3)
RNA-seq of non coding RNA (3)
ChIP-chip by tiling array (2)
Human - Single-cell sequencing (2)
Human - High-throughput sequencing (2)
Animal - High-throughput sequencing (2)
Cell line - High-throughput sequencing (2)
Genotyping by array (2)
MicroRNA profiling by array (2)
DNA-seq (2)
Proteomic profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Differential (1)
MeDIP-seq (1)
Animal - One-color microarray (1)
Human - One-color microarray (1)
Antigen profiling (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)

Release Date

2022 (228)
2021 (221)
2024 (179)
2020 (175)
2023 (173)
2025 (171)
2015 (151)
2018 (138)
2014 (134)
2013 (125)
2016 (120)
2019 (117)
2017 (96)
2012 (90)
2010 (80)
2011 (71)
2009 (45)
2008 (44)
2026 (29)
2007 (25)
2005 (8)
2006 (7)
2004 (5)
2002 (5)
2001 (3)
1999 (3)
2000 (2)
1998 (2)
1997 (2)
1996 (2)

Lab affiliation

Cellular Proteomics, Helmholtz Centre for Infection Research, Braunschweig, Germany (4)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse (4)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (3)
Departments of Immunology and Radiation Oncology Moffitt Cancer Center Tampa, FL, USA (2)
Cellzome (2)
Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, Rhode Island, USA (2)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse, France (2)
Laboratory of Vaccines for the Developing World, Institute for Glycomics, Southport, QLD, Australia (1)
Immunology Moffitt Cancer Center Tampa, FL, USA (1)
Assistant Member, Immunology Department St. Jude Children's Research Hospital Memphis, TN USA (1)
Precision and Systems Biomedicine Laboratory, QIMR Berghofer Medical Research Institute, Herston, QLD, Australia (1)
Yale Cancer Biology Institute, Yale University, West Haven, CT 06516, USA. (1)
CSIC/UAB Proteomics Facility. IIBB-CSIC, IDIBAPS. Barcelona, Spain. (1)
Institute of Pharmacology and Structural Biology CNRS, Toulouse (1)
Institut de Pharmacologie et Biologie Structurale-CNRS (1)
Sanquin Research, department of Plasma Proteins, Plesmanlaan 125, 1066 CX Amsterdam, the Netherlands (1)
Director of Proteomics Core Facility, Children's Hospital of Philadelphia, Philadelphia, PA USA (1)
Cancer Research UK Scotland Institute, Garscube Estate, Switchback Road, Glasgow G61 1BD UK School of Cancer Sciences, University of Glasgow, Garscube Estate, Switchback Road, Glasgow G61 1QH, UK (1)
Marseille Protéomique, Inserm, CNRS, Aix-Marseille Université, Centre d'Immunology de Marseille-Luminy (CIML), Centre de Recherche en Cancérologie de Marseille (CRCM) (1)
Chair, Department of Metabolism and Nutritional Programming Van Andel Institute (1)
Maria Sklodowska‐Curie National Research Institute of Oncology, Gliwice Poland (1)
CSIC/UAB Proteomics Laboratory, IIBB-CSIC, Barcelona, Spain (1)
University of Chieti-Pescara, Depatment of Pharmacy (1)
Brown University, Molecular Biology, Cell Biology, Biochemistry (1)
Department of Microbiology and Immunology, The Scripps Research Institute; Jupiter, FL, USA (1)
Director, Protein and Proteomics Core Children's Hospital of Philadelphia Research Institute (1)
Department of Microbiology and Immunology, Lineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill (1)
Proteomics Platform CIC bioGUNE (1)
Turku Bioscience, University of Turku and Åbo Akademi University (1)
University of Vienna, Department of Analytical Chemistry, Joint Metabolome Facility (1)

Location

China (2)
Germany (1)
United States (1)
France (1)

Keyword

Oxaliplatin (2)
Removab (1)
Immune infiltrate (1)
Aldesleukin (1)
Antibodies, Bispecific (1)
PD-1 activated CIK (1)
MUC1 (1)
Bispecific antibody (1)
First line (1)
Interleukin-2 (1)
Pembrolizumab (1)
Antibodies (1)
Capecitabine (1)
Immunotherapy (1)
Leucovorin (1)
Bevacizumab (1)
Fluorouracil (1)

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Mucosal-Associated-Invariant-T (MAIT) cells stimulated with IL-12/IL-12, anti-CD3/CD28 or both for 16 hours

Not available

ORGANISM(S): Homo sapiens

ST001653 | MetabolomicsWorkbench

Anti-CD3 model of intestinal inflammation

PRJEB85305 | ENA

Gene expression profile of CD4+ T-cells restimulated by anti-CD3 and anti-ICOS compared to anti-CD3 alone

Engagement of the ICOS receptor represents a key event in a process that culminates in Bcl6 expression and acquisition of the TFH and TFR phenotype. To better understand the essentials of ICOS-mediated signaling pathway, we profiled the changes in gene expression elicited after co-ligation of ICOS a...

ORGANISM(S): Mus musculus

2014-09-23 | E-GEOD-61284 | biostudies-arrayexpress

Transcription profiling of human peripheral blood monocytes from a patient with a heterozygous deletion of the CARMA1 gene cultured with anti-CD3, anti-CD3 and anti-CD28 or lipopolysaccharide

PBMCs were isolated from whole blood taken from one patient and one healthy control. Cells were cultured in media (RPMI) alone, with 1µg/ml anti-CD3, with 1µg/ml anti-CD3 & 1µg/ml anti-CD28 or with 0.5ng/ml LPS. Cells were harvested after 24 or 48 hours, RNA isolated using Trizol, purified using R...

ORGANISM(S): Homo sapiens

2022-04-01 | E-MTAB-101 | biostudies-arrayexpress

ChIP-seq of resting and anti-CD3/CD28-stimuated Jurkat cells

PRJNA1162470 | ENA

4C-seq of resting and anti-CD3/CD28-stimuated Jurkat cells

PRJNA1162467 | ENA

Transcriptome of human T cell stimulated with anti-CD3 antibody.

PRJNA449397 | ENA

ATAC-seq of resting and anti-CD3/CD28-stimuated Jurkat cells

PRJNA1158708 | ENA

RNA-seq of resting and anti-CD3/CD28-stimuated Jurkat cells

PRJNA1158706 | ENA

Expression data from human peripheral blood lymphocytes stimulated with anti-CD3 and anti-CD28 antibodies.

Peripheral blood lymphocytes were separated in the Ficoll gradient and subjected for stimulation with anti-CD3 and anti-CD28 antiobodies upon time (6h, 12h and 18h). Next, total RNA was isolated and trenscriptional analysis of stimulated cells was performed. 11 total samples were analysed. Analysis ...

ORGANISM(S): Homo sapiens

2013-02-25 | E-GEOD-29624 | biostudies-arrayexpress

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