Aoki H H - OmicsDI

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Unknown (1560)
Transcriptomics (32)
Proteomics (31)
Metabolomics (13)
Genomics (4)

Organisms

Streptococcus thermophilus (25)
Trypanosoma evansi (25)
Schistosoma japonicum (25)
Argulus foliaceus (25)
Oenothera glazioviana (25)
NEWT:2126719 (25)
Ruditapes decussatus (25)
Desulfofundulus kuznetsovii DSM 6115 (25)
Paulownia (25)
Rathayibacter toxicus (25)
Betacoronavirus sp. (25)
Pseudomonas sp. UK4 (25)
Chlorocebus aethiops aethiops (25)
Pseudomonas aeruginosa (25)
Methylorubrum extorquens DM4 (25)
Naegleria fowleri (25)
Neurospora crassa (25)
Methylorubrum extorquens PA1 (25)
artificial sequences (25)
Homo sapiens (15)
Mus musculus (14)
Arabidopsis thaliana (3)
Paralichthys olivaceus (2)
Azotobacter vinelandii (2)
Oryza sativa (1)
Solanum lycopersicum (1)
Rattus norvegicus (1)
Clostridium cellulovorans 743B (1)
Escherichia coli (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (33)
pride (25)
MetaboLights (13)
jPOST (6)
EGA (3)

Tissue

Liver (6)
Cell culture (5)
Embryonic stem cell (4)
Multinuclear osteoclast (1)
Pancreatic cancer cell (1)
Mammary gland epithelial cell (1)
Osteoclast (1)
Breast cancer cell (1)
Pancreas (1)
Blood platelet (1)
Macrophage (1)
Brain (1)
Blood plasma (1)
Hepatocyte (1)
Lung (1)
Permanent cell line cell (1)
Epithelial cell (1)
Platelet (1)

Disease

Obesity (2)
Disease free (2)
Pancreatic ductal carcinoma (1)
Chronic myeloid leukemia (1)
Cardiovascular system disease (1)
Alzheimer's disease (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (25)
Shotgun proteomics (14)
Mass spectrometry (12)
Bottom-up proteomics (7)
Data-dependent acquisition (6)
Affinity purification coupled with mass spectrometry proteomics (6)
Data-independent acquisition (2)
Mass spectrometry assay (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
Illumina HiSeq 2000 (2)
Liquid Chromatography MS - negative - reverse phase (2)
Agilent Microarray Scanner (1)
Illumina Genome Analyzer IIx (1)
HiSeq X Ten (1)
Illumina MiSeq (1)
6550 Q-TOF LC-MS Agilent (1)
LTQ Orbitrap Velos (Thermo Scientific) (1)
Liquid Chromatography MS - (1)
Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2022 (7)
2023 (7)
2020 (6)
2015 (6)
2014 (5)
2013 (5)
2024 (5)
2019 (5)
2017 (4)
2026 (4)
2025 (4)
2011 (3)
2007 (3)
2021 (3)
2018 (3)
2016 (2)
2010 (2)
2012 (1)
2009 (1)
2008 (1)

CHEBI ID

CHEBI:23849 (3)
CHEBI:36615 (3)
CHEBI:17509 (3)
CHEBI:17203 (3)
CHEBI:18050 (3)
CHEBI:15971 (3)
CHEBI:16015 (3)
CHEBI:17895 (3)
CHEBI:17295 (3)
CHEBI:25106 (2)
CHEBI:139465 (2)
CHEBI:66395 (2)
CHEBI:17818 (2)
CHEBI:28527 (2)
CHEBI:16778 (2)
CHEBI:17226 (2)
CHEBI:15937 (2)
CHEBI:16765 (2)
CHEBI:36281 (2)
CHEBI:18066 (2)
CHEBI:68352 (2)
CHEBI:16264 (2)
CHEBI:17822 (2)
CHEBI:16680 (2)
CHEBI:16811 (2)
CHEBI:16349 (2)
CHEBI:16112 (2)
CHEBI:28044 (2)
CHEBI:17196 (2)
CHEBI:17620 (2)

Metabolite Name

Diterpenoids (2)
Macrolides and analogues (2)
S-adenosyl-L-homocysteine (2)
L-citrulline (2)
L-aspartic acid (2)
L-asparagine (2)
L-glutamic acid (2)
L-glutamine (2)
L-proline (2)
L-histidine (2)
Triterpenoids (2)
L-lysine (2)
L-arginine (2)
4-O-trans-caffeoylquinic acid (1)
2-hydroxy-2-(4-hydroxybenzyl)succinic acid (1)
(3R,5R)-3,4,5-tris{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}-1-hydroxycyclohexane-1-carboxylic acid (1)
3-(4-hydroxyphenyl)-1-{2,4,6-trihydroxy-3,5-bis(2S,3R,4R,5S,6R)[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}propan-1-one (1)
(1S,3S,4R,5R)-3-{[(2E)-3-(3,4-dihydroxyphenyl)-2-propenoyl]oxy}-1,4,5-trihydroxycyclohexanecarboxylic acid (1)
(3E)-1-hydroxy-4-[(1R)-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-buten-2-yl beta-D-glucopyranoside (1)
(2E)-3-[4-(beta-D-Glucopyranosyloxy)-3-methoxyphenyl]acrylic acid (1)
(2E)-N-[2-(3,4-dihydroxyphenyl)ethyl]-3-(3,4-dimethoxyphenyl)acrylamide (1)
(3R)-3,7-dimethyl-1,6-octadien-3-yl 6-O-alpha-L-arabinopyranosyl-beta-D-glucopyranoside (1)
{2-[5-(hexopyranosyloxy)pent-2-en-1-yl]-3-oxocyclopentyl}acetic acid (1)
5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-1-benzopyran-3-yl 6-O-(6-deoxyhexopyranosyl)hexopyranoside (1)
8-[6-(3-{[6-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranosyl]oxy}-5,7-dihydroxy-4-oxo-4H-1-benzopyran-2-yl)-2,3-dihydroxyphenyl]-2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-1-benzopyran-3-yl 6-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranoside (1)
Kaempferol 3-O-beta-D-galactoside (1)
Kaempferol 3-O-beta-D-glucoside (1)
2,6-dihydroxy-2-[(4-hydroxyphenyl)methyl]-3-oxo-2,3-dihydro-1-benzofuran-4-yl hexopyranoside (1)
5-{4-[4-(hexopyranosyloxy)-3,5-dimethoxyphenyl]tetrahydro-1H,3H-furo[3,4-c]furan-1-yl}-2-methoxyphenyl hexopyranoside (1)
[4-(4-hydroxy-3-methoxybenzyl)-2-(4-hydroxy-3-methoxyphenyl)tetrahydro-3-furanyl]methyl hexopyranoside (1)

Study type

Transcription profiling by array (25)
RNA-seq of coding RNA (6)
Animal - One-color microarray (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2023 (180)
2025 (159)
2021 (159)
2022 (148)
2020 (142)
2024 (131)
2019 (106)
2018 (93)
2017 (83)
2016 (71)
2015 (67)
2014 (53)
2013 (34)
2026 (30)
2012 (25)
2011 (22)
2010 (16)
2008 (14)
2007 (12)
2009 (11)
2004 (8)
2006 (7)
2005 (6)
2003 (4)
2000 (3)
2002 (2)
2001 (2)
1999 (2)
1998 (1)
1997 (1)

Lab affiliation

Associate Professor Department of Biochemistry Room 220, Research and Innovation Centre, University of Regina, Regina, Saskatchewan S4S 0A2 (4)
Department of Biochemistry, University of Regina, Regina, Saskatchewan S4S 0A2, Canada. (2)
Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of British Columbia (2)
Department of Pharmacy, The University of Tokyo Hospital (1)
Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Curitiba, PR, Brazil (1)
University of Saskatchewan (1)
University of British Columbia, Faculty of Medicine, Department of Biochemistry and Molecular Biology, Life Sciences Institute (1)
1. Environmental Health Science and Research Bureau, HECSB, Health Canada, Ottawa, ON 2. Interdisciplinary School of Health Sciences, Faculty of Health Sciences, University of Ottawa, Ottawa, ON (1)
Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA Department of Pharmacology, University of Washington, Seattle, WA, USA (1)
Yale Department of Chemistry (1)
Agriculture and Agri-Food Canada, Ottawa Research and Development Centre (1)
University of British Columbia Faculty of Medicine Department of Biochemistry and Molecular Biology (1)
Department of Biochemistry and Molecular Biology, Life Sciences Institute, University of British Columbia, Vancouver, British Columbia, Canada (1)
Osaka Univ. (1)
Research and Innovation Centre, University of Regina, SK S4S OA2, Canada (1)
University of British Columbia, Faculty of Medicine, Department of Biochemistry and Molecular Biology (1)
Department of Biochemistry and Molecular Biology, Life Sciences Institute, University of British Columbia, Vancouver, British Columbia, Canada. (1)
Donnelly CCBR, University of Toronto, Toronto ON M5S 3E1, Canada (1)
Univeristy of Georgia (1)
Donnelly Centre, Department of Molecular Genetics,Department of Biochemistry,University of Toronto, Ontario, Canada (1)

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Glycerin-Induced Conformational Changes in Bombyx mori Silk Fibroin Film Monitored by (13)C CP/MAS NMR and ¹H DQMAS NMR.

Not available

S-EPMC5037794 | biostudies-literature

Radiolytic Synthesis of Pt-Particle/ABS Catalysts for H₂O₂ Decomposition in Contact Lens Cleaning.

Not available

S-EPMC5618346 | biostudies-literature

Development of serological assays to identify Helicobacter suis and H. pylori infections.

Not available

S-EPMC10139984 | biostudies-literature

Gene expression in the epidermis including guard cells of phot1 phot2 and pGC1::SOC1-GFP/phot1 phot2

Stomata pores are surrounded by a pair of guard cells in the epidermis in plants. Stomata apature is controlled by environmental factors. Stomata opening is also enhanced by introduction of SOC1-GFP driven by GC1 promoter in phot1 phot2 double mutants (pGC1::SOC1-GFP/ phot1 phot2). Epidermis includi...

ORGANISM(S): Arabidopsis thaliana

2015-02-04 | E-GEOD-60183 | biostudies-arrayexpress

Resolvin E3 attenuates allergic airway inflammation via the interleukin-23-interleukin-17A pathway.

Not available

S-EPMC6902733 | biostudies-literature

Fatal COVID-19 pulmonary disease involves ferroptosis.

SARS-CoV-2 infection causes severe pulmonary manifestations, with poorly understood mechanisms and limited treatment options. Hyperferritinemia and disrupted lung iron homeostasis in COVID-19 patients imply that ferroptosis, an iron-dependent cell death, may occur. Immunostaining and lipidomic an...

2024-07-11 | MTBLS3107 | MetaboLights

The conidial mucilage, natural film coatings, is involved in environmental adaptability and pathogenicity of Hirsutella satumaensis Aoki.

Not available

S-EPMC5431061 | biostudies-literature

Association of Night-to-Night Adherence of Continuous Positive Airway Pressure With Day-to-Day Morning Home Blood Pressure and Its Seasonal Variation in Obstructive Sleep Apnea.

Not available

S-EPMC9075445 | biostudies-literature

Comprehensive analysis of platelet glycoprotein Ibα ectodomain glycosylation.

Not available

S-EPMC10065957 | biostudies-literature

Identification of the modifications in artificial E. coli rRNAs

Ribosome biogenesis is pivotal in the self-replication of life. In Escherichia coli, three ribosomal RNAs and 54 ribosomal proteins are synthesized and subjected to cooperative hierarchical assembly facilitated by numerous accessory factors. Realizing ribosome biogenesis in vitro is a critical miles...

2024-12-09 | MTBLS7425 | MetaboLights

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1640 Results

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